Pairwise Alignments

Query, 354 a.a., nitrogen regulation protein NR(II) from Vibrio cholerae E7946 ATCC 55056

Subject, 1013 a.a., PAS domain S-box from Dechlorosoma suillum PS

 Score = 89.4 bits (220), Expect = 4e-22
 Identities = 83/288 (28%), Positives = 131/288 (45%), Gaps = 57/288 (19%)

Query: 107 LAEMRTIGQQRRLTQ-ELNQHAQQQAAKLLVRGLAHEIKNPLGGLRGAAQLLERMLPD-- 163
           LAE + + Q+    Q +L Q  +  +   L  G+AHE+ NP+G +      L+  L +  
Sbjct: 722 LAEAKALNQRLAEAQSQLLQSEKMASIGQLAAGVAHEMNNPIGFVYSNLGTLDHYLREIF 781

Query: 164 -----------------PALMEYTQIIIEQA-DRLRGLVDRLLGPQRPG----------- 194
                              L    Q+ +E+  D LR  + +LL   R G           
Sbjct: 782 AIIAAYEAADSGPCRDCRQLESARQLKLEKDFDFLRSDIVQLLAESRDGLERVAKIARDL 841

Query: 195 ---------EKKWENLHLILEKVRQLVELEAGANLVFERDYDPSLPNILMDTDQIEQALL 245
                    E +W +LH  L+    +V  E        ++Y   LP +  +  QI Q  +
Sbjct: 842 KDFSRAGEAESQWADLHQGLDSTLNIVWNELKYKCTVHKEYG-ELPLVWCEPSQINQVFM 900

Query: 246 NIVSNAAQILTNQTHGVITLRTRTVHQANIHGQRHKLVASIEIIDNGPGIPPELQDTLFY 305
           N++ NAAQ +  +  G I LRT         G+R   V  + + D+G GI PE    LF 
Sbjct: 901 NLLVNAAQAIPKK--GDIWLRT---------GRRGDEVF-VAVSDSGCGIAPEYLHRLFE 948

Query: 306 PMVSGRE--GGTGLGLSISQNLIDQHQGKIEVQSWPGR-TVFTIYLPI 350
           P  + +    GTGLGLS++ +++ +HQG++EV+S PGR + FT++LPI
Sbjct: 949 PFFTTKPVGKGTGLGLSLAYSIVQKHQGRLEVESEPGRGSTFTVWLPI 996