Pairwise Alignments

Query, 354 a.a., nitrogen regulation protein NR(II) from Vibrio cholerae E7946 ATCC 55056

Subject, 551 a.a., signal transduction histidine kinase, nitrogen specific, NtrB from Marinobacter adhaerens HP15

 Score = 99.4 bits (246), Expect = 2e-25
 Identities = 101/355 (28%), Positives = 169/355 (47%), Gaps = 59/355 (16%)

Query: 6   ELSQTIINNQVTSVLILDESLMIRYANPAAEQLF--SQSAKRLMHQSLNHLVQHSSLDLQ 63
           +++Q II    T +L+LD    IR AN AAE+L   +  A   +H+              
Sbjct: 210 KINQQIIQRMRTGILVLDRFGQIRLANAAAEELLYGAPKASAPIHERAT----------- 258

Query: 64  LLTQPLQSGQSITDSDVTLVID------SKPLMLEVTVSPISWHKE---LLLLAEMRTIG 114
           +L +PL+ G      D T  I+      + PL L+V  + +   +    L+ + +M  + 
Sbjct: 259 VLPKPLKQGLDAWLKDPTQRIEPFQPSPTSPL-LQVNFTQLDQERGDQILVFIEDMSKVT 317

Query: 115 QQRRLTQELNQHAQQQAAKL--LVRGLAHEIKNPLGGLRGAAQLLERMLP-DPALMEYTQ 171
           QQ +         Q + A L  L  G+AHEI+NPLG +  AAQL+E     DP   +   
Sbjct: 318 QQAQ---------QMKLASLGRLTAGIAHEIRNPLGAISHAAQLMEESPNLDPGDHQMLG 368

Query: 172 IIIEQADRLRGLVDRLLGPQRPGEKKWENLHLI-----LEKVRQLV-----ELEAGANLV 221
           II   + R+ G+++ +L   R   ++  N  LI     L++ ++       E  A A+++
Sbjct: 369 IIRRHSRRVNGIIENVLDLSR---RRAANADLIEVAPWLQEFKEDFLQTQNEGRAEADII 425

Query: 222 FERDYDPSLPNILMDTDQIEQALLNIVSNAAQILTNQTHGVITLRTRTVHQ-ANIHGQRH 280
            +   DP LP+   D  QIEQ ++N+  N  +  + Q  G    R   +H  A   G+R 
Sbjct: 426 LK--IDPQLPSARFDKSQIEQVMVNLCDNGLRY-SEQHSGQ---RRIGIHAGATEDGER- 478

Query: 281 KLVASIEIIDNGPGIPPELQDTLFYPMVSGREGGTGLGLSISQNLIDQHQGKIEV 335
                I++ D GPGI PE ++++F P  +  + GTGLGL +++ L + +Q  + +
Sbjct: 479 ---TYIDVRDQGPGIAPEHRNSVFEPFFTTDKTGTGLGLYLARELCEANQAHLSL 530