Pairwise Alignments

Query, 354 a.a., nitrogen regulation protein NR(II) from Vibrio cholerae E7946 ATCC 55056

Subject, 803 a.a., sensor histidine kinase (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 94.0 bits (232), Expect = 1e-23
 Identities = 90/339 (26%), Positives = 157/339 (46%), Gaps = 38/339 (11%)

Query: 19  VLILDESLMIRYANPAAEQLFSQSAKRLMHQSLNHLVQHSSLDLQLLTQPLQSGQSITDS 78
           +L+LD    I +AN +AE++      + +   L  L+  + L    + +P Q   ++ D 
Sbjct: 483 LLLLDGHGAIVFANGSAERM-----AKAIPGGLPRLLDDAGLP-DAVAEPAQMEIALEDG 536

Query: 79  DVTLVIDSKPLMLEVTVSPISWHKELLLLAEMRTIGQQRRLTQELNQHAQQQAAKLLVRG 138
             + VI+  PL           H     +  +R   +++R+  ++ Q  +  +   L  G
Sbjct: 537 R-SFVINVYPLA--------QTHGRNRSVVYLRETTREKRMFDQMRQQEKLASVGRLAAG 587

Query: 139 LAHEIKNPLGGLRGAAQLLERMLPDPALMEYTQIIIEQADRLRGLVDRLLGPQRPGEKKW 198
           LAHEI NPLG +   A+LL+  + D        II+    + + +V  LL   RP + + 
Sbjct: 588 LAHEINNPLGVIMCYAELLQTQVGDSQARHDLDIILRHTLQAQRVVRDLLDFARPKDTRC 647

Query: 199 ENLHLILEKVRQLVEL------EAGANLVFERDYDPSLPNILMDTDQIEQALLNIVSNAA 252
           E    I + +  +VE+      ++G N+    D +P LP +  D D + Q   N++ NA 
Sbjct: 648 EACD-INDVLSDIVEIFMPKARKSGVNV--SLDLEPDLPRVYADRDSLGQVFSNLLLNAL 704

Query: 253 QILTNQTHGVITLRTRTVHQANIHGQRHKLVASIEIIDNGPGIPPELQDTLFYPMVSGRE 312
             +  +T G I + T         G+ + +  +I   DNGPGIP   +D +F P  + +E
Sbjct: 705 DAVPERT-GTIAIST--------CGKGYGVTVTIR--DNGPGIPEAHRDRIFDPFYTTKE 753

Query: 313 --GGTGLGLSISQNLIDQHQGKIEVQSWPGRTVFTIYLP 349
              GTGLGL++   ++    G I+V +  G T F ++ P
Sbjct: 754 TGRGTGLGLAVVYGIMRDLNGNIDVSTDDGAT-FILHFP 791