Pairwise Alignments

Query, 354 a.a., nitrogen regulation protein NR(II) from Vibrio cholerae E7946 ATCC 55056

Subject, 733 a.a., sensory box histidine kinase (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  115 bits (288), Expect = 4e-30
 Identities = 97/354 (27%), Positives = 175/354 (49%), Gaps = 29/354 (8%)

Query: 9   QTIINNQVTSVLILDESLMIRYANPAAEQLFSQSAKRLMHQSLNHLVQHSSLDL--QLLT 66
           + +++N    V+ LD S  I+  N AA  +    ++RL  +     +    LD+   +LT
Sbjct: 396 EAVLDNIAAGVISLDASGRIQTVNKAAASILGTPSERLKGRRPAAFLDGPYLDIIDDMLT 455

Query: 67  QPLQSGQSITDSDVTLVIDSKPLMLEVTVSPISWHKELL--LLAEMRTIGQQRRLTQELN 124
           Q  +  +   +  + L    + L L V    +      +  ++A    I +  R+     
Sbjct: 456 QLHRRPEMHWERQMDLSGSDRALKLLVHAVALRGVDGSVDGIVAVFEDISELERM----- 510

Query: 125 QHAQQQAA-KLLVRGLAHEIKNPLGGLRGAAQLLERM----LPDPALMEYTQIIIEQADR 179
              Q+ AA + + R +AHEIKNPL  ++ +AQ LER     + DP   + T +I++Q + 
Sbjct: 511 ---QRMAAWREVARRIAHEIKNPLTPIKLSAQRLERKFGPRVDDPVFGQCTALIVKQVEH 567

Query: 180 LRGLVDRLLGPQRPGE--KKWENLHLILEKVRQLVELEAGANLVFERDYDPSLPNILMDT 237
           L+ +V       +  E   +  ++  +LE+V  L      + + ++ D  P+LP + MD 
Sbjct: 568 LQQMVQEFSTFAKLPEVTPRAGDITPLLEEVTGLFR-HGHSRIAWQVDIAPALPPVRMDG 626

Query: 238 DQIEQALLNIVSNAAQILTNQTHGVITLRTRTVHQANIHGQRHKLVASIEIIDNGPGIPP 297
           + + +A +NI++NA + L       I +      QA+   +R ++   +EI DNGPG+ P
Sbjct: 627 EALHRAFINILTNAIEALEGTATPSINV------QASHDAERARV--RVEIADNGPGLTP 678

Query: 298 ELQDTLFYPMVSGREGGTGLGLSISQNLIDQHQGKIEVQSWP-GRTVFTIYLPI 350
           E +  +F P  + ++GGTGLGLSI +++++ H G +     P G TV T+ LP+
Sbjct: 679 EERSRMFEPYFTSKKGGTGLGLSIVRSIVNDHGGHVRAAGAPGGGTVVTVELPV 732