Pairwise Alignments

Query, 354 a.a., nitrogen regulation protein NR(II) from Vibrio cholerae E7946 ATCC 55056

Subject, 579 a.a., sensory box histidine kinase (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 99.4 bits (246), Expect = 2e-25
 Identities = 90/351 (25%), Positives = 158/351 (45%), Gaps = 28/351 (7%)

Query: 11  IINNQVTSVLILDESLMIRYANPAAEQLFSQSAKRLMHQSLNHLVQHSSLDLQLLTQPLQ 70
           +++N    ++ +  S  I  ANPAA  +   +  RL   S+  L +     +  + +   
Sbjct: 229 LLDNLPDGLITVSRSDTISAANPAAHGILGIAPGRLAGMSIAELPEGIVAPVARVAEGGS 288

Query: 71  SGQSITDSDVTLVIDSKPLMLEVTVSPISW----HKELLLLAEMRTIGQQRRLTQELNQH 126
           S +    +            LEV   PI      H  L+++ +   I   R L + L++ 
Sbjct: 289 SAEPEAAAGRWFTRSVGGAHLEVLTLPIRQGDDDHDRLVIIRDRTQI---RELEKNLSEA 345

Query: 127 AQQQAAKLLVRGLAHEIKNPLGGLRGAAQLLERML----PDPALMEYTQIIIEQADRLRG 182
            +  A   L  G+AHEI+NPL  LRG AQ   + L    PD     Y Q ++ +ADRL  
Sbjct: 346 EKLAALGTLAAGVAHEIRNPLSALRGFAQYFAKKLVGRQPDET---YAQTMVREADRLNR 402

Query: 183 LVDRLLGPQRPG--EKKWENLHLILEKVRQLVELEAGA-NLVFERDYDPSLPNILMDTDQ 239
           ++  LL   RP   + +  +L  ++  +  LV  +    N+  +    P +  +  D D 
Sbjct: 403 VITDLLYLSRPRAMDARAVSLGQLVADIGNLVRFDLEKRNIALKVSLGPDI--VWADEDA 460

Query: 240 IEQALLNIVSNAAQILTNQTHGVITLRTRTVHQANIHGQRHKLVASIEIIDNGPGIPPEL 299
           ++QA+LN+V N+   L     G      R +H ++  G     V    + D+GPG+    
Sbjct: 461 LKQAVLNLVLNSIDALEGLATG-----EREIHVSSAQGDGGTWVF---VGDSGPGMSALQ 512

Query: 300 QDTLFYPMVSGREGGTGLGLSISQNLIDQHQGKIEVQSWPGR-TVFTIYLP 349
           ++  F P  + ++ GTGLGL++    + +H G+ ++ S  GR T  +++ P
Sbjct: 513 REQAFEPFFTTKKKGTGLGLALVHKTMREHDGRAQIDSEMGRGTTVSLFFP 563