Pairwise Alignments

Query, 354 a.a., nitrogen regulation protein NR(II) from Vibrio cholerae E7946 ATCC 55056

Subject, 348 a.a., signal transduction histidine kinase, nitrogen specific, NtrB (RefSeq) from Shewanella sp. ANA-3

 Score =  354 bits (908), Expect = e-102
 Identities = 188/345 (54%), Positives = 250/345 (72%), Gaps = 3/345 (0%)

Query: 9   QTIINNQVTSVLILDESLMIRYANPAAEQLFSQSAKRLMHQSLNHLVQHSSLDLQLLTQP 68
           +T++N+ VT+VL++D+ L   YAN AAEQL    + RL+ Q+L    Q   ++ Q+L+  
Sbjct: 4   ETLLNHLVTAVLVIDKDLKPCYANAAAEQLLGVGSHRLVEQALPEHYQALGVEAQILSDA 63

Query: 69  LQSGQSITDSDVTLV-IDSKPLMLEVTVSPISWHKELLLLAEMRTIGQQRRLTQELNQHA 127
           +++GQ +T +  TLV +D++   +++T+ P+    +L LL E+R + QQRR+ Q+L+Q A
Sbjct: 64  VKAGQGLTVNTATLVTLDAQHHTVDLTLIPLEDEAQLSLL-ELRQVDQQRRIHQQLSQDA 122

Query: 128 QQQAAKLLVRGLAHEIKNPLGGLRGAAQLLERMLPDPALMEYTQIIIEQADRLRGLVDRL 187
           QQQAA+ LVR LAHEIKNPLGGLRGAAQLL R L DPA  E+T +IIEQADRLR LVDRL
Sbjct: 123 QQQAAQFLVRNLAHEIKNPLGGLRGAAQLLSRELDDPAQKEFTNLIIEQADRLRSLVDRL 182

Query: 188 LGPQRPGEKKWENLHLILEKVRQLVELEAGANLVFERDYDPSLPNILMDTDQIEQALLNI 247
           LGPQRP +    N+H +++KV +LVE+   AN+  +RDYDPS+P+I MD DQ++QA+LNI
Sbjct: 183 LGPQRPTQHSLHNIHQVVQKVYKLVEMALPANIQLKRDYDPSIPDIEMDPDQMQQAVLNI 242

Query: 248 VSNAAQILTNQTHGVITLRTRTVHQANIHGQRHKLVASIEIIDNGPGIPPELQDTLFYPM 307
           + NA Q L   T G I +RTRT HQ  I  QRHKLV ++ IIDNGPGIPPEL DTLFYPM
Sbjct: 243 LQNAVQAL-EHTGGEILIRTRTQHQVTIGSQRHKLVLTLSIIDNGPGIPPELMDTLFYPM 301

Query: 308 VSGREGGTGLGLSISQNLIDQHQGKIEVQSWPGRTVFTIYLPILN 352
           V+ RE G+GLGLSI+ N+   H G+I+  S PG T F I LPIL+
Sbjct: 302 VTSREQGSGLGLSIAHNIARLHSGRIDCVSSPGHTEFIISLPILS 346