Pairwise Alignments

Query, 609 a.a., translational GTPase TypA from Vibrio cholerae E7946 ATCC 55056

Subject, 596 a.a., GTP-binding protein LepA (RefSeq) from Shewanella amazonensis SB2B

 Score =  162 bits (409), Expect = 5e-44
 Identities = 138/508 (27%), Positives = 237/508 (46%), Gaps = 66/508 (12%)

Query: 6   IEKLRNIAIIAHVDHGKTTLVDKLLQQSGTLESRGDVEERVMDSNDIEKERGITILAKN- 64
           ++ +RN +IIAH+DHGK+TL D+L+Q  G L  R ++ E+V+DS D+E+ERGITI A++ 
Sbjct: 1   MKHIRNFSIIAHIDHGKSTLSDRLIQVCGGLTDR-EMAEQVLDSMDLERERGITIKAQSV 59

Query: 65  ----TAINWNDYRINIVDTPGHADFGGEVERIMSMVDSVLLIVDAVDGPMPQTRFVTQKA 120
               TA N   Y++N +DTPGH DF  EV R ++  +  LL+VDA  G   QT      A
Sbjct: 60  TLDYTAKNGETYQLNFIDTPGHVDFSYEVSRSLAACEGALLVVDAGQGVEAQTLANCYTA 119

Query: 121 FAHGLKPIVVINKIDRPGARPDWVMDQVFDLFDNLGATDEQLDFQVVYASALNGWATLVE 180
               L+ + V+NKID P A P+ V  ++ D+   + ATD                A    
Sbjct: 120 LEMDLEVVPVLNKIDLPQAEPERVAAEIEDIV-GIEATD----------------AVRCS 162

Query: 181 GETGENMEPLFQAIVDNVAAPQVDLDGPLQMQISQLDYSSYVGVIGVGRIKRGKVKPNQQ 240
            +TG  +  + + IV  + +P+ D + PLQ  I    + SY+GV+ + RIK G +K   +
Sbjct: 163 AKTGVGIGEVLETIVAQIPSPEGDPEAPLQALIIDSWFDSYLGVVSLVRIKNGVLKKGDK 222

Query: 241 VTVIGADGKKRNGKIGTVLGYLGLQRSETDQATAGDIVAVTGLGEL---KISD--TICDV 295
             V+         ++G    +    + + +  T      + G+ E+    + D  T+   
Sbjct: 223 FKVMSTGQAYNADRVGI---FTPKMKDQAELKTGQVGYVIAGIKEIHGAPVGDTLTLAKH 279

Query: 296 NALEALPPLSVDEPTVTMTFQVNTSPFAGKEGKFVTSRNILERLEKELVHNVALRVEQTE 355
            A + LP     +P      QV    F      + + R+ L +L    +++ +L+ E   
Sbjct: 280 GADKPLPGFKKAKP------QVYAGVFTISTDDYESFRDALNKLS---LNDASLQFEPET 330

Query: 356 DPD---KFRVSGRGELHLSILIENMRRE-GFELAVSRP----EVILKHED---------- 397
                  FR+   G LH+ I+ E + RE   +L  + P    EV+L + +          
Sbjct: 331 SSALGFGFRIGYLGLLHMEIIQERLEREYDLDLITTAPTVEYEVLLTNGETLYVDNPSDL 390

Query: 398 ------GQLMEPFETVTIDVQEEHQGGIMEKIGMRKGELKDMSPDGKGRIRMDFVMPSRG 451
                  ++ EP     I V +E+ G ++     ++G  K+M   G  ++ + + +P+  
Sbjct: 391 PATNYIEEMREPIVQANILVPKEYLGNVITLCIEKRGVQKNMVYHG-NQVALTYDIPAAE 449

Query: 452 LI-GFQTEFMTLTSGSGLLYHSFDHYGP 478
           ++  F     + + G   L ++F  + P
Sbjct: 450 VVMDFFDRLKSTSRGYASLEYNFIRFEP 477