Pairwise Alignments

Query, 609 a.a., translational GTPase TypA from Vibrio cholerae E7946 ATCC 55056

Subject, 596 a.a., GTP-binding protein LepA (RefSeq) from Shewanella loihica PV-4

 Score =  157 bits (398), Expect = 9e-43
 Identities = 132/508 (25%), Positives = 235/508 (46%), Gaps = 70/508 (13%)

Query: 6   IEKLRNIAIIAHVDHGKTTLVDKLLQQSGTLESRGDVEERVMDSNDIEKERGITILAKNT 65
           ++ +RN +IIAH+DHGK+TL D+L+Q+ G L  R ++  +V+DS D+E+ERGITI A++ 
Sbjct: 1   MKHIRNFSIIAHIDHGKSTLSDRLIQECGGLSDR-EMAAQVLDSMDLERERGITIKAQSV 59

Query: 66  AINWN-----DYRINIVDTPGHADFGGEVERIMSMVDSVLLIVDAVDGPMPQTRFVTQKA 120
            +++       Y++N +DTPGH DF  EV R ++  +  LL+VDA  G   QT      A
Sbjct: 60  TLDYKAKDGETYQLNFIDTPGHVDFSYEVSRSLAACEGALLVVDAGQGVEAQTLANCYTA 119

Query: 121 FAHGLKPIVVINKIDRPGARPDWVMDQVFDLFDNLGATDEQLDFQVVYASALNGWATLVE 180
               L  + V+NKID P A P+ V +++ D+   + A D                A    
Sbjct: 120 LDMDLDVVPVLNKIDLPQADPERVAEEIEDIV-GIEAAD----------------AVRCS 162

Query: 181 GETGENMEPLFQAIVDNVAAPQVDLDGPLQMQISQLDYSSYVGVIGVGRIKRGKVKPNQQ 240
            +TG  +  + + IV  +  P+ D + PLQ  I    + SY+GV+ + RIK G +K   +
Sbjct: 163 AKTGLGISDVLETIVAQIPPPEGDPEAPLQALIIDSWFDSYLGVVSLVRIKHGVLKKGDK 222

Query: 241 VTVIGADGKKRNGKIGTVLGYLGLQRSETDQATAGDI-VAVTGLGEL---KISD--TICD 294
             V+         ++G        ++++T Q + G++   + G+ E+    + D  T+  
Sbjct: 223 FKVMSTGQTHTADRVGIFTP----KQTDTAQLSTGEVGFVIAGIKEIHGAPVGDTLTLAK 278

Query: 295 VNALEALPPLSVDEPTV-TMTFQVNTSPFAGKEGKFVTSRNILERLEKELVHNVALRVEQ 353
             A + LP     +P V    F ++T  +           N  + L K  +++ +L  E 
Sbjct: 279 NGADKPLPGFKKVKPQVYAGVFPISTDDY----------ENFRDALNKLSLNDASLFFEP 328

Query: 354 TEDPD---KFRVSGRGELHLSILIENMRRE-GFELAVSRPEVILK--------------- 394
                    FR+   G LH+ I+ E + RE   +L  + P V+ +               
Sbjct: 329 ETSSALGFGFRIGYLGLLHMEIIQERLEREYNLDLITTAPTVVYEVVTTKGETIYVDNPS 388

Query: 395 -----HEDGQLMEPFETVTIDVQEEHQGGIMEKIGMRKGELKDMSPDGKGRIRMDFVMP- 448
                +   ++ EP     I V +E+ G ++     ++G   +M   G  ++ + + MP 
Sbjct: 389 DLPPMNNIEEMREPIVETNILVPKEYLGNVITLCIEKRGVQTNMVYHG-NQVAITYDMPM 447

Query: 449 SRGLIGFQTEFMTLTSGSGLLYHSFDHY 476
           +  ++ F     + + G   L ++F  +
Sbjct: 448 AEVVMDFFDRLKSTSRGYASLEYNFKRF 475