Pairwise Alignments

Query, 609 a.a., translational GTPase TypA from Vibrio cholerae E7946 ATCC 55056

Subject, 691 a.a., translation elongation factor G (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  112 bits (280), Expect = 5e-29
 Identities = 58/136 (42%), Positives = 86/136 (63%), Gaps = 2/136 (1%)

Query: 6   IEKLRNIAIIAHVDHGKTTLVDKLLQQSGTLESRGDVEE--RVMDSNDIEKERGITILAK 63
           I+  RNI I+AH+D GKTT  +++L  +G     G+V +    MD  + E+ERGITI + 
Sbjct: 7   IDMQRNIGIMAHIDAGKTTTTERILFYTGVSHKIGEVHDGAATMDWMEQEQERGITITSA 66

Query: 64  NTAINWNDYRINIVDTPGHADFGGEVERIMSMVDSVLLIVDAVDGPMPQTRFVTQKAFAH 123
            T   W ++R+NI+DTPGH DF  EVER + ++D  + + DAV G  PQ+  V ++A  +
Sbjct: 67  ATTCFWREHRVNIIDTPGHVDFTIEVERSLRVLDGAVCVFDAVAGVEPQSETVWRQADRY 126

Query: 124 GLKPIVVINKIDRPGA 139
           G+  I  +NK+DR GA
Sbjct: 127 GVPRICFVNKMDRIGA 142



 Score = 72.8 bits (177), Expect = 5e-17
 Identities = 64/227 (28%), Positives = 106/227 (46%), Gaps = 35/227 (15%)

Query: 187 MEPLFQAIVDNVAAPQVDLDG---------------------PLQMQISQLDYSSYVGVI 225
           ++PL  A+VD + +P VD++                      PL   + +L    Y+G +
Sbjct: 268 VQPLLDAVVDFLPSP-VDIEQMKGVNPDKEEETIVCPCDDKEPLAALVFKLFSDPYIGHL 326

Query: 226 GVGRIKRGKVKPNQQVTVIGADGKKRNGKIGTVLGYLGLQRSETDQATAGDIVAVTGLGE 285
              RI  G ++    +TV+ A+  KR  ++G +L     +R E   A AGDIVA+ GL  
Sbjct: 327 SFCRIYSGFIESG--MTVLNANTGKRE-RVGRLLKMHANKREEIKWAGAGDIVALVGLKL 383

Query: 286 LKISDTICDVNALEALPPLSVDEPTVTMTFQVNTSPFAGKEGKFVTSRNILERLEKELVH 345
               DTICD      L  L + EP + +  +  T     K  +   S   L +L KE   
Sbjct: 384 ASTGDTICDEKRPVVLESLDIPEPVIEVAIEPKT-----KADRDALSA-ALAKLAKE--- 434

Query: 346 NVALRVEQTEDPDKFRVSGRGELHLSILIENMRRE-GFELAVSRPEV 391
           + + RV+  ++ ++  ++G GELHL I+++ + RE      V +P+V
Sbjct: 435 DPSFRVKGDDETNQTLIAGMGELHLEIIVDRLTREFSVNANVGKPQV 481



 Score = 35.0 bits (79), Expect = 1e-05
 Identities = 21/78 (26%), Positives = 36/78 (46%), Gaps = 3/78 (3%)

Query: 400 LMEPFETVTIDVQEEHQGGIMEKIGMRKGELKDMSPD-GKGRIRMDFVMPSRGLIGFQTE 458
           L+EP   V +   +E+ G +M  +  R+G+++ M    G   IR    +P   + G+ T+
Sbjct: 600 LLEPIMDVEVVTPDEYLGDVMGDLNGRRGKVQSMEARVGAQSIRAQ--VPLSEMFGYATD 657

Query: 459 FMTLTSGSGLLYHSFDHY 476
             + T G       F HY
Sbjct: 658 LRSKTQGRATFSMQFHHY 675