Pairwise Alignments

Query, 609 a.a., translational GTPase TypA from Vibrio cholerae E7946 ATCC 55056

Subject, 601 a.a., GTP-binding protein LepA (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  163 bits (412), Expect = 2e-44
 Identities = 139/478 (29%), Positives = 220/478 (46%), Gaps = 62/478 (12%)

Query: 4   PQIEKLRNIAIIAHVDHGKTTLVDKLLQQSGTLESRGDVEERVMDSNDIEKERGITILAK 63
           P+ E +RN +IIAH+DHGK+TL D++L+ +G +  R +  ++ +D  D+E+ERGITI A+
Sbjct: 2   PRQEHIRNFSIIAHIDHGKSTLADRILEVTGLVSDR-EKRDQYLDRMDLERERGITIKAQ 60

Query: 64  NTAINWND-----YRINIVDTPGHADFGGEVERIMSMVDSVLLIVDAVDGPMPQTRFVTQ 118
              I +       Y +N++DTPGH DF  EV R ++  D  LL+VDA  G   QT     
Sbjct: 61  TVRIPFTSKTGRKYILNLIDTPGHVDFNYEVSRSLAACDGALLVVDASQGVEAQTLANVY 120

Query: 119 KAFAHGLKPIVVINKIDRPGARPDWVMDQVFDLFDNLGATDEQLDFQVVYASALNGWATL 178
            A  H    I V+NKID P +  D V  ++ +    L  TD                A  
Sbjct: 121 LALDHDHDIIPVLNKIDLPSSDVDRVKAEIEESI-GLDCTD----------------AIA 163

Query: 179 VEGETGENMEPLFQAIVDNVAAPQVDLDGPLQMQISQLDYSSYVGVIGVGRIKRGKVKPN 238
           V  +TG N++ + +AIV+ + AP+ +L+ PL+  I    Y SY GV+ + R+  G ++  
Sbjct: 164 VSAKTGMNVDKVLEAIVERLPAPEGNLNAPLKALIFDSWYDSYQGVVVLFRVMDGVLRKG 223

Query: 239 QQVTVIGADGKKRNGKIGTVLGYLGLQRSETDQATAGDIVA-VTGLGELKISDTI--CDV 295
            +V +   +      ++G     + +  +E      G + A +  LG+ K+ DTI   D 
Sbjct: 224 DRVRMFATEKSYEVIRLGVFSPDI-VDVAELGAGEVGFLCANIKELGDAKVGDTITHTDR 282

Query: 296 NALEALPPLSVDEPTVTMTFQVNTSPFAGKEGKFVTSRNILE-RLEKELVHNVALRVEQT 354
            A E +P     +P V          F G           L+  LEK  +++ A   E  
Sbjct: 283 PASEPVPGFKEVQPMV----------FCGLYPTDAAEYEPLKASLEKLQLNDAAFSYEPE 332

Query: 355 EDPD---KFRVSGRGELHLSILIENMRRE-GFELAVSRPEVILKHE--DGQ--------- 399
                   FR    G LH+ I+ E + RE   +L  + P VI K E  DG+         
Sbjct: 333 TSQALGFGFRCGFLGLLHMEIIQERLEREFQVDLIATAPSVIYKVETVDGKTQDIDNPSK 392

Query: 400 ---------LMEPFETVTIDVQEEHQGGIMEKIGMRKGELKDMSPDGKGRIRMDFVMP 448
                    L EP+  + I V  E  G +++    ++G  K+M      R+ + + +P
Sbjct: 393 LPDPTRITSLYEPYVRMDIHVPNEFVGNVLKLCEEKRGIQKNMGYIAANRVVITYELP 450