Pairwise Alignments

Query, 609 a.a., translational GTPase TypA from Vibrio cholerae E7946 ATCC 55056

Subject, 593 a.a., GTP-binding protein, membrane GTPase lepA (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  153 bits (386), Expect = 2e-41
 Identities = 141/505 (27%), Positives = 233/505 (46%), Gaps = 70/505 (13%)

Query: 6   IEKLRNIAIIAHVDHGKTTLVDKLLQQSGTLESRGDVEERVMDSNDIEKERGITILAKNT 65
           ++ +RN  IIAH+DHGK+TL D+LL+ + T++       +++D  D+EKERGITI +   
Sbjct: 1   MKNIRNFCIIAHIDHGKSTLADRLLEFTNTIQVTNG---QMLDDMDLEKERGITIKSHAI 57

Query: 66  AINWN----DYRINIVDTPGHADFGGEVERIMSMVDSVLLIVDAVDGPMPQTRFVTQKAF 121
            + +N     Y +N++DTPGH DF  EV R ++  +  LLIVDA  G   QT      A 
Sbjct: 58  QMEYNYKGEKYILNLIDTPGHVDFSYEVSRSIAACEGALLIVDASQGVQAQTISNLYMAI 117

Query: 122 AHGLKPIVVINKIDRPGARPDWVMDQVFDLFDNLGATDEQLDFQVVYASALNGWATLVEG 181
            H L+ I +INK D   A P+ V D++ +L   LG   +    +++ AS          G
Sbjct: 118 EHDLEIIPIINKCDMASAMPEEVEDEIVEL---LGCKRD----EIIRAS----------G 160

Query: 182 ETGENMEPLFQAIVDNVAAPQVDLDGPLQMQISQLDYSSYVGVIGVGRIKRGKVKPNQQV 241
           +TG  +E +  A+++ +  P+ D + PLQ  I    ++S+ G+I   +I+ G ++   +V
Sbjct: 161 KTGMGVEEILAAVIERIPHPEGDEEAPLQALIFDSVFNSFRGIIAYFKIENGVIRKGDKV 220

Query: 242 TVIGADGKKRNGKIGTVLGYLGLQRSETDQATAGDIVA-VTGLGELKISDTICDVNALEA 300
                 GK+ +     VL    + R+E      G I++ +    E+K+ DTI  V A   
Sbjct: 221 KFFNT-GKEYDADEVGVLKMELVPRNELRTGDVGYIISGIKTSKEVKVGDTITHV-ARPC 278

Query: 301 LPPLSVDEPTVTMTFQVNTSPFAGKEGKFVTSRNILERLEKELVHNVALRVEQTEDPDK- 359
              ++  E    M F     P   ++  F   R  LE+L+   +++ +L    T  P+  
Sbjct: 279 DKAIAGFEEVKPMVF-AGVYPIEAED--FEDLRASLEKLQ---LNDASL----TFQPESS 328

Query: 360 ------FRVSGRGELHLSILIENMRRE-GFELAVSRPEVILKHEDGQ------------- 399
                 FR    G LH+ I+ E + RE    +  + P V     D Q             
Sbjct: 329 LALGFGFRCGFLGLLHMEIVQERLDREFDMNVITTVPNVSYNIYDKQGNMKEVHNPGGMP 388

Query: 400 -------LMEPFETVTIDVQEEHQGGIMEKIGMRKGELKDMSPDGKGRIRMDFVMP-SRG 451
                  + EP+   +I    ++ G IM     ++GEL         R+ + + MP    
Sbjct: 389 DPTLIDHIEEPYIKASIITTTDYIGPIMTLCLGKRGELLKQEYISGNRVEIYYNMPLGEI 448

Query: 452 LIGFQTEFMTLTSGSGLLYHSFDHY 476
           +I F     +++ G    Y SFD++
Sbjct: 449 VIDFYDRLKSISKG----YASFDYH 469