Pairwise Alignments

Query, 305 a.a., type II secretion system protein GspC from Vibrio cholerae E7946 ATCC 55056

Subject, 244 a.a., Type II secretion system protein C from Enterobacter sp. TBS_079

 Score = 58.5 bits (140), Expect = 1e-13
 Identities = 57/236 (24%), Positives = 98/236 (41%), Gaps = 27/236 (11%)

Query: 69  AERQPLDISVLQKGELFGVFTEPKEAPVVEQPVVVDAPKTRLSLVLSGVVASNDAQKSLA 128
           A+ QPL     +K   F +FT      +   P  + AP   L+  + G+V S+D   S A
Sbjct: 30  ADAQPLKNRREEK--TFTLFTAAARQDI--GPAALKAP---LAAEIEGIVRSDDPWLSFA 82

Query: 129 VIANRGVQATYGINEVIEG-TQAKLKAVMPDRVIISNSGRDETLMLEGLDYTAPATASVS 187
           VI     Q +Y   E + G   A ++ +  D V+++  G  +TL L+  DY      S  
Sbjct: 83  VIKTPAGQKSYREGEPLTGFNDAFIQEINKDSVVVNYEGITQTLALKKPDYFKGGVDSG- 141

Query: 188 NPPRPRPNQPNAVPQFEDKVDAIREAIARNPQEIFQYVRLSQVKRDDKVLGYRVSPGKDP 247
                        P  +   DA  + +  N      Y+ L  V    ++ GY ++P    
Sbjct: 142 -------------PVTKSTKDAGADTLHLN-----DYLVLKPVVEKGQLEGYAINPRNAS 183

Query: 248 VLFESIGLQDGDMAVALNGLDLTDPNVMNTLFQSMNEMTEMSLTVERDGQQHDVYI 303
             +   GL+ GD+AV +N +D+T+      +    ++M E  + V R     ++ +
Sbjct: 184 SFYSHSGLKKGDVAVEVNAVDMTNEVKAKNIIAEWSKMKEAEVVVRRHAHLENIRV 239