Pairwise Alignments

Query, 674 a.a., type II secretion system protein GspD from Vibrio cholerae E7946 ATCC 55056

Subject, 724 a.a., type IV pilus secretin PilQ/competence protein from Dechlorosoma suillum PS

 Score =  117 bits (294), Expect = 1e-30
 Identities = 100/390 (25%), Positives = 184/390 (47%), Gaps = 53/390 (13%)

Query: 252 LIKQLDVEMAAKGN--------NRVVYLKYAKAEDLVEVLKGVSENLQAEKGTGQPTTSK 303
           L+K+ ++E+ AK               L Y +AE   +VL    + + +++G+       
Sbjct: 350 LLKKEELELQAKQQISDVEPLKTETFQLNYQRAEAFHKVLTDEKQRILSKRGSA------ 403

Query: 304 RNEVMIAAHADTNSLVLTAPQDIMNAMLEVIGQLDIRRAQVLIEALIVEMAEGDGINLGV 363
                      TN+L +      +  + ++I + D+   QVLIEA IVE  +    NLGV
Sbjct: 404 ------VMDPRTNTLFIQDTPTRLEELRKIIAKTDVPVRQVLIEARIVEATDNFSKNLGV 457

Query: 364 QWGSLE-SGSVIQYGNTGASIGNVMIGLEEAKDTTQ---TKAVYDTNN--------NFLR 411
           + G  + S  V   G   + IG  M  L++A++T Q   ++ +  T            + 
Sbjct: 458 RLGFNDISNPVNGTGRLQSRIGGSM--LDQARETYQNVISRTIDATTGIETITRPAKVML 515

Query: 412 NETTTTKGDYTKL---ASALSSIQGAAVSIAMGDWTAL------INAVSNDSSSNILSSP 462
           + + T     T +   ASA+   Q  A S+ + + +A       ++A+  D    ++SSP
Sbjct: 516 DNSATYNNSATSVNLPASAIKGSQAGAFSLVLFNPSATRFLNLELSALEVDGKGKVVSSP 575

Query: 463 SITVMDNGEASFIVGEEVPVITGSTAGSNNDNPFQTVDRKEVGIKLKVVPQINEGNSV-- 520
            +   D  EA    G E+P    +++G+        V  K+  + LKV PQI     V  
Sbjct: 576 RVMTSDQAEAIIEQGIEIPYQQATSSGAT------AVMFKKANLSLKVKPQITPDGRVIM 629

Query: 521 QLNIEQEVSNVLGANGAVDVRFAKRQLNTSVMVQDGQMLVLGGLIDERALESESKVPLLG 580
            L+I ++V +   A+  + ++   + + T ++V++G  +V+GG+ +E   ++ S++P LG
Sbjct: 630 SLDINKDVPDTTIASNVIAIK--TKHIKTDILVENGGTVVIGGIYEETENQATSRIPFLG 687

Query: 581 DIPLLGQLFRSTSSQVEKKNLMVFIKPTII 610
           D+P +G LFR+T +  +K  L++FI P I+
Sbjct: 688 DLPYVGFLFRNTRTDRDKVELLIFITPKIV 717