Pairwise Alignments

Query, 674 a.a., type II secretion system protein GspD from Vibrio cholerae E7946 ATCC 55056

Subject, 688 a.a., type 4 fimbrial biogenesis protein PilQ from Marinobacter adhaerens HP15

 Score =  113 bits (282), Expect = 3e-29
 Identities = 97/401 (24%), Positives = 183/401 (45%), Gaps = 53/401 (13%)

Query: 224 LKPKFVADERTNSILI---SGDPKVRERLKRLIKQLDVEMAAKGNNRVVYLKYAKAEDLV 280
           LK K +   +  ++L+   + +   RE+L+    +   E+A    + +V + YAKA D+V
Sbjct: 325 LKTKGLDKRQIGNVLLVAPADEIAAREKLELETSKQIAELAPVRLD-IVQVNYAKAADIV 383

Query: 281 EVLKGVSENLQAEKGTGQPTTSKRNEVMIAAHADTNSLVLTAPQDIMNAMLEVIGQLDIR 340
            ++K   E L +++G             +++   TN++ +    + +  +  ++   D+ 
Sbjct: 384 ALIKE-DEELISDRG------------FVSSDVRTNTISVRETAEKLEEIRRLVSTWDVP 430

Query: 341 RAQVLIEALIVEMAEGDGINLGVQWGSLESGSVIQYGNTGASIGNVMIGLEEAKDTTQTK 400
             QV IEA IV        NLGV+WG     +    G+   ++G     L+EA+D     
Sbjct: 431 VRQVSIEARIVRAQTNVAENLGVRWGG---AAYDVSGDNVFTVGGSQGSLQEARDAAAG- 486

Query: 401 AVYDTNNNFLRNETTTTKGDYTKLASALSSIQGAAVSIAMGDWTALIN----AVSNDSSS 456
                      N  T +      +   +S    ++ +I  G    L++    A+ +D  +
Sbjct: 487 -----------NSNTISFPGALAVDLGVSGEGTSSFAIGWGSDNFLVDLELSALESDGQA 535

Query: 457 NILSSPSITVMDNGEASFIVGEEVPVITGSTAGSNNDNPFQTVDRKEVGIKLKVVPQINE 516
            ++S P +   D   AS   GEE+P    +++G+ N      ++ KE  + L+V PQI  
Sbjct: 536 EVVSQPRVVTADRQTASIKSGEEIPYQEATSSGATN------IEFKEAVLSLEVTPQITP 589

Query: 517 GNSVQLNIEQEVSNVLGANGAVDVRFAKRQLNTS-----VMVQDGQMLVLGGLIDERALE 571
            + + +++      V+  +   +V      +NT+     V+V +G+ +VLGG+       
Sbjct: 590 DDKIIMDL------VVNQDSRGEVTAGIPSINTNSVTTQVLVGNGETVVLGGIFQSEVAT 643

Query: 572 SESKVPLLGDIPLLGQLFRSTSSQVEKKNLMVFIKPTIIRD 612
             +K P LGDIP LG++F+ T    E+  L++FI P II++
Sbjct: 644 QTTKTPFLGDIPYLGRIFKRTEHLDERSELLIFITPKIIKN 684