Pairwise Alignments

Query, 503 a.a., type II secretion system protein GspE from Vibrio cholerae E7946 ATCC 55056

Subject, 472 a.a., General secretion pathway protein E from Pseudomonas fluorescens FW300-N2E2

 Score =  473 bits (1216), Expect = e-138
 Identities = 254/493 (51%), Positives = 339/493 (68%), Gaps = 30/493 (6%)

Query: 17  LPFSFANRFKLVLDWNEDFSQASIYYLAPLSMEALVETKRVVKHAFQLIELSQA---EFE 73
           LP+++A   +LVL      ++ ++  + P +    +     V+  F L+ L +    E +
Sbjct: 4   LPYAWAKAQRLVL---RQSAEGAVLMVCPSTPGWSISE---VRRQFGLVRLERVRDEELD 57

Query: 74  SKLTQVYQRDSSEARQLMEDIGADSD--DFFSLAEELPQNEDLLESEDDAPIIKLINAML 131
             L   Y    S A      +GA  +  D   L +++P+  DLL+++D AP+I++INA+L
Sbjct: 58  GLLNSAYADTGSAAAV----VGAAENEVDLDRLMQDIPEITDLLDTQDGAPVIRMINALL 113

Query: 132 GEAIKEGASDIHIETFEKTLSIRFRVDGVLREVLAPSRKLSSLLVSRVKVMAKLDIAEKR 191
            +A ++ ASDIHIE +E    +R+RVDG LR+V++P + L   LVSR+K+MA+LDIAEKR
Sbjct: 114 TQAARDEASDIHIEPYESHSVVRYRVDGTLRDVVSPRKALHGALVSRIKIMAQLDIAEKR 173

Query: 192 VPQDGRISLRIGGRAVDVRVSTMPSSHGERVVMRLLDKNATRLDLHSLGMTAHNHDNFRR 251
           +PQDGRI+LR+ GR +D+RVST+P+ HGERVVMRLLDK A RL L +LGM          
Sbjct: 174 LPQDGRIALRVAGRPIDIRVSTVPTGHGERVVMRLLDKQAGRLQLETLGMDPDVLGKLDH 233

Query: 252 LIKRPHGIILVTGPTGSGKSTTLYAGLQELNSSERNILTVEDPIEFDIDGIGQTQVNPRV 311
           LI++PHGI+LVTGPTGSGK+T+LYA L  L++S  NILTVEDP+E+D+ GI Q QVN ++
Sbjct: 234 LIRQPHGIVLVTGPTGSGKTTSLYASLARLDASVHNILTVEDPVEYDLPGISQIQVNAKI 293

Query: 312 DMTFARGLRAILRQDPDVVMVGEIRDLETAQIAVQASLTGHLVMSTLHTNTAVGAVTRLR 371
           DMTFA  LRAILRQDPD++M+GEIRDLETAQIAVQASLTGHLV++TLHTN AV A+ RL 
Sbjct: 294 DMTFALALRAILRQDPDIIMIGEIRDLETAQIAVQASLTGHLVLATLHTNDAVSAINRLI 353

Query: 372 DMGIEPFLISSSLLGVLAQRLVRTLCPDCKEPYEADKEQRKLFDSKKKEPLILYRATGCP 431
           DMG+EPFL++SS+LGVLAQRLVR LCP CK+P  A                  +R  GCP
Sbjct: 354 DMGVEPFLLASSMLGVLAQRLVRRLCPQCKQPDPATPG--------------TWRPVGCP 399

Query: 432 KCNHKGYRGRTGIHELLLVDDALQELIHSEAGEQAMEKHI-RATTPSIRDDGLDKVRQGI 490
            CN  GY GRTGIHEL  +DD ++ LIH  AGEQA+     RA   S+R+DG   VR G 
Sbjct: 400 SCNQTGYSGRTGIHELFCIDDDIRTLIHQGAGEQALRAAARRAGMFSMREDGERWVRSGT 459

Query: 491 TSLEEVMRVTKES 503
           T+ EE++RVT+++
Sbjct: 460 TAPEEILRVTRDA 472