Pairwise Alignments

Query, 503 a.a., type II secretion system protein GspE from Vibrio cholerae E7946 ATCC 55056

Subject, 483 a.a., General secretion pathway protein E from Pseudomonas fluorescens FW300-N2E2

 Score =  526 bits (1354), Expect = e-154
 Identities = 275/487 (56%), Positives = 358/487 (73%), Gaps = 6/487 (1%)

Query: 17  LPFSFANRFKLVLDWNEDFSQASIYYLAPLSMEALVETKRVVKHAFQLIELSQAEFESKL 76
           LPF FA RF ++L+   +    S+       + A+ E +R+      +  L    F ++L
Sbjct: 1   LPFGFARRFGVLLEG--EGPTLSLVMRGDTPLTAVAEVRRLCGRDLPIQVLEPTLFAARL 58

Query: 77  TQVYQRDSSEARQLMEDIGADSD-DFFSLAEELPQNEDLLESEDDAPIIKLINAMLGEAI 135
             VY++  S A Q+ +  G D + D  SLA+++PQ  DLLE + DAPII+LINA+L EA+
Sbjct: 59  ASVYRQGQSAAEQVAQ--GLDEELDLLSLADQMPQTTDLLEQQGDAPIIRLINALLSEAV 116

Query: 136 KEGASDIHIETFEKTLSIRFRVDGVLREVLAPSRKLSSLLVSRVKVMAKLDIAEKRVPQD 195
           +E ASD+H+ETFE+ LS+R R+DG L+E+L P R+L++LLVSR+KVMA+LDIAEKRVPQD
Sbjct: 117 REQASDVHLETFEQYLSVRMRIDGQLQEMLRPRRELANLLVSRIKVMARLDIAEKRVPQD 176

Query: 196 GRISLRIGGRAVDVRVSTMPSSHGERVVMRLLDKNATRLDLHSLGMTAHNHDNFRRLIKR 255
           GR++LR+ G  VDVRVST+PS+HGERVV+RLLDK A RLDLH LG+      + R L+ +
Sbjct: 177 GRMALRLAGHEVDVRVSTLPSAHGERVVLRLLDKQAGRLDLHRLGLPDDTLADLRLLLGK 236

Query: 256 PHGIILVTGPTGSGKSTTLYAGLQELNSSERNILTVEDPIEFDIDGIGQTQVNPRVDMTF 315
           PHGI+LVTGPTGSGK+T+LYA L  +N   RNILTVEDPIE+ + GIGQ  VNP+VDMTF
Sbjct: 237 PHGIVLVTGPTGSGKTTSLYAALSSINDQSRNILTVEDPIEYHLPGIGQMPVNPKVDMTF 296

Query: 316 ARGLRAILRQDPDVVMVGEIRDLETAQIAVQASLTGHLVMSTLHTNTAVGAVTRLRDMGI 375
           ARGLRAILRQDPDVVMVGEIRD ETA+IAVQASLTGHLV+STLHTNTAVGAVTRL DMG+
Sbjct: 297 ARGLRAILRQDPDVVMVGEIRDRETAEIAVQASLTGHLVLSTLHTNTAVGAVTRLVDMGV 356

Query: 376 EPFLISSSLLGVLAQRLVRTLCPDCKEPYEADKEQRKLFDSKKKEPLILYRATGCPKCNH 435
           + +L++SSL G++AQRL+R LCP CK PY AD    +           L++A GC +C  
Sbjct: 357 DAYLLASSLAGIVAQRLLRALCPSCKTPYVADAATCRRLGLDAGAAPRLFKAQGCEQC-Q 415

Query: 436 KGYRGRTGIHELLLVDDALQELIHSEAGEQAMEKHIRATTPSIRDDGLDKVRQGITSLEE 495
           KGYRGR GI+EL+ V  AL +LIH  A EQA+    R T+ S+  DG  +V +G+TS++E
Sbjct: 416 KGYRGRFGIYELVNVGAALSQLIHQGATEQALAAEARKTSRSLFQDGRQRVLEGLTSVDE 475

Query: 496 VMRVTKE 502
           ++R+T+E
Sbjct: 476 LLRITQE 482