Pairwise Alignments

Query, 503 a.a., type II secretion system protein GspE from Vibrio cholerae E7946 ATCC 55056

Subject, 594 a.a., Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB from Pseudomonas stutzeri RCH2

 Score =  338 bits (868), Expect = 2e-97
 Identities = 171/389 (43%), Positives = 264/389 (67%), Gaps = 4/389 (1%)

Query: 119 DDAPIIKLINAMLGEAIKEGASDIHIETFEKTLSIRFRVDGVLREVLAPSRKLSSLLVSR 178
           +D+ I+ +++ +   A ++ ASDIHIE   +  S+RFR+DGVL  V     +++  +VSR
Sbjct: 203 NDSHIVNIVDWLFQYAFQQRASDIHIEPRREQGSVRFRIDGVLHNVYQFPPQVTMAVVSR 262

Query: 179 VKVMAKLDIAEKRVPQDGRISLRI-GGRAVDVRVSTMPSSHGERVVMRLLDKNATRLDLH 237
           +K + ++++AEKR PQDGR+  +   G  V++R+ST+P++ GE++VMR+ D         
Sbjct: 263 LKSLGRMNVAEKRKPQDGRVKTKTPDGGEVELRLSTLPTAFGEKMVMRIFDPEVLLKGFD 322

Query: 238 SLGMTAHNHDNFRRLIKRPHGIILVTGPTGSGKSTTLYAGLQELNSSERNILTVEDPIEF 297
            LG +A +   ++ +  +P+GIILVTGPTGSGK+TTLY  L++L + E N+ T+EDPIE 
Sbjct: 323 QLGFSADDLRRWQSMTSQPNGIILVTGPTGSGKTTTLYTTLKQLATPEVNVCTIEDPIEM 382

Query: 298 DIDGIGQTQVNPRVDMTFARGLRAILRQDPDVVMVGEIRDLETAQIAVQASLTGHLVMST 357
                 Q QV   +++TFA G+RA++RQDPD++MVGEIRDLETA++A+QA+LTGHLV+ST
Sbjct: 383 IEGAFNQMQVQHNIELTFASGVRALMRQDPDIIMVGEIRDLETAEMAIQAALTGHLVLST 442

Query: 358 LHTNTAVGAVTRLRDMGIEPFLISSSLLGVLAQRLVRTLCPDCKEPYEADKEQRKLFDSK 417
           LHTN A  A+TRL ++G+  +L+ ++LLGV+AQRLVRTLCP CK P + D +        
Sbjct: 443 LHTNDAPSAITRLLELGVPHYLLKATLLGVMAQRLVRTLCPHCKAPMQLDADDWSALTKP 502

Query: 418 KKEPL--ILYRATGCPKCNHKGYRGRTGIHELLLVDDALQELIHSEAGEQAMEKH-IRAT 474
              PL     +A GC +C   G+RGR G++E++L++DA++ LI ++    A+ +   +  
Sbjct: 503 WNAPLPTTAQQAVGCLECRDTGFRGRAGVYEIMLLNDAIKPLITADTDIVALRRQAFKDG 562

Query: 475 TPSIRDDGLDKVRQGITSLEEVMRVTKES 503
             S+R  G  K+  G+T++EEV+RVT +S
Sbjct: 563 MRSLRLSGAQKIAAGLTTVEEVLRVTPQS 591