Pairwise Alignments

Query, 503 a.a., type II secretion system protein GspE from Vibrio cholerae E7946 ATCC 55056

Subject, 567 a.a., type IV-A pilus assembly ATPase PilB from Pseudomonas stutzeri RCH2

 Score =  352 bits (903), Expect = e-101
 Identities = 187/431 (43%), Positives = 282/431 (65%), Gaps = 7/431 (1%)

Query: 76  LTQVYQRDSSEARQLMEDIGADSDDFFSLAEELPQNEDLLESEDDAPIIKLINAMLGEAI 135
           + ++Y   S+    L  D+  D  D  S++++  + ++  E+ DDAP+++ +N ML +AI
Sbjct: 140 IDKLYDNGSTGLEDL-GDVDLDGVDVESVSDD-GKGDEAGETADDAPVVRFVNKMLLDAI 197

Query: 136 KEGASDIHIETFEKTLSIRFRVDGVLREVLAPSRKLSSLLVSRVKVMAKLDIAEKRVPQD 195
           + G+SD+H E +EK   +R R DG+L EV  P  +L+  + +R+KVMA LDI+E+R PQD
Sbjct: 198 RGGSSDLHFEPYEKAFRVRLRTDGILHEVARPPIQLAPRISARLKVMAGLDISERRRPQD 257

Query: 196 GRISLRIG-GRAVDVRVSTMPSSHGERVVMRLLDKNATRLDLHSLGMTAHNHDNFRRLIK 254
           GRI +++   +A+D RV+T+P+  GE++VMR+LD ++ ++ + +LG      + +   +K
Sbjct: 258 GRIKMKLSKNKAIDFRVNTLPTLWGEKIVMRILDPSSAQMGIDALGYEEDQKELYMNALK 317

Query: 255 RPHGIILVTGPTGSGKSTTLYAGLQELNSSERNILTVEDPIEFDIDGIGQTQVNPRVDMT 314
           +P G+ILVTGPTGSGK+ +LY GL  LN+ + NI T EDP+E +++GI Q  VNPR  M 
Sbjct: 318 QPQGMILVTGPTGSGKTVSLYTGLNILNTVDVNISTAEDPVEINLEGINQVNVNPRQGMD 377

Query: 315 FARGLRAILRQDPDVVMVGEIRDLETAQIAVQASLTGHLVMSTLHTNTAVGAVTRLRDMG 374
           F++ LRA LRQDPD++MVGEIRDLETA+IA++A+ TGH+VMSTLHTN+A   +TRLR+MG
Sbjct: 378 FSQALRAFLRQDPDIIMVGEIRDLETAEIAIKAAQTGHMVMSTLHTNSAAETLTRLRNMG 437

Query: 375 IEPFLISSSLLGVLAQRLVRTLCPDCKEPYEADKEQ--RKLFDSKKKEPLILYRATGCPK 432
           +  F I++S+  ++AQRL R LC  CK+  E  +E    + F + K     +Y   GC  
Sbjct: 438 VAAFNIATSVNLIIAQRLARKLCNSCKKEVELPREALLGEGFPADKIGAFKIYGPVGCDN 497

Query: 433 CNHKGYRGRTGIHELLLVDDALQELIHSEAGEQAMEKHIRAT-TPSIRDDGLDKVRQGIT 491
           C   GY+GR GI+E++    AL  +I  +     +   +R      +R   L K  QG+T
Sbjct: 498 CK-GGYKGRVGIYEVVKNTPALARIIMEDGNSIDISTQMRKDGFNDLRTSALVKAMQGVT 556

Query: 492 SLEEVMRVTKE 502
           SLEEV RVTK+
Sbjct: 557 SLEEVNRVTKD 567