Pairwise Alignments

Query, 503 a.a., type II secretion system protein GspE from Vibrio cholerae E7946 ATCC 55056

Subject, 585 a.a., type II secretion system protein E (GspE) from Pseudomonas syringae pv. syringae B728a

 Score =  392 bits (1006), Expect = e-113
 Identities = 208/437 (47%), Positives = 298/437 (68%), Gaps = 17/437 (3%)

Query: 71  EFESKLTQVYQRDSSEARQLMEDIGADSDDFFSLAEELPQNEDLLESEDDAPIIKLINAM 130
           E E+ + + Y +  S    L+E++  +          L   E L +   +AP+I+L+N +
Sbjct: 156 EVETLIERYYGQGRSAMGTLIENLDEEGGS-------LEDIEHLKDLASEAPVIRLVNLI 208

Query: 131 LGEAIKEGASDIHIETFEKTLSIRFRVDGVLREVLAPSRKLSSLLVSRVKVMAKLDIAEK 190
           L  A+++ ASDIHIE FE  L +R+R+DGVL E  AP    S+ ++SRVK+MA+LDIAE+
Sbjct: 209 LQRAVEQRASDIHIEPFESQLKVRYRIDGVLHEAEAPPSSSSAAVISRVKIMARLDIAER 268

Query: 191 RVPQDGRISLRIGGRAVDVRVSTMPSSHGERVVMRLLDKNATRLDLHSLGMTAHNHDNFR 250
           R+PQDGRI LRI G+ +D+RVST+P+S GE VVMRLLD+     D  SLG      D F 
Sbjct: 269 RLPQDGRIMLRIQGKELDLRVSTVPTSFGESVVMRLLDRQTINFDFPSLGFDGERLDEFL 328

Query: 251 RLIKRPHGIILVTGPTGSGKSTTLYAGLQELNSSERNILTVEDPIEFDIDGIGQTQVNPR 310
            +++RPHGI+LVTGPTGSGK+TTLY  L  LN++ER I+TVEDP+E+ ++GI Q QV P 
Sbjct: 329 DVLERPHGILLVTGPTGSGKTTTLYTALSRLNTAERKIITVEDPVEYQLEGINQIQVKPS 388

Query: 311 VDMTFARGLRAILRQDPDVVMVGEIRDLETAQIAVQASLTGHLVMSTLHTNTAVGAVTRL 370
           + + FA  LR+I+RQDPDV+M+GE+RDLET +IA+Q+SLTGHLV+STLHTN+A  ++TRL
Sbjct: 389 IGLDFAGALRSIVRQDPDVIMIGEMRDLETCRIAIQSSLTGHLVLSTLHTNSAAASITRL 448

Query: 371 RDMGIEPFLISSSLLGVLAQRLVRTLCPDCKEPYEADKE---QRKLFDSKKKEPLILYRA 427
            DMG+E +LI+S++ G+LAQRLVR L P  +E ++A  E   +  L     + P+ LYR 
Sbjct: 449 LDMGVESYLIASTVNGILAQRLVRRLDPATREAFDAPPELIAEHGLERFTDERPIRLYR- 507

Query: 428 TGCPKCNHK--GYRGRTGIHELLLVDDALQELIHSEAGEQAMEKHI-RATTPSIRDDGLD 484
              P+ +    GYRGR+ I ELL++++ L+ L+   A    +E+   R    ++ ++GL 
Sbjct: 508 ---PRADAPGGGYRGRSAITELLVMNEELRSLLMRHADASTLEEAARRGGLRTLHEEGLR 564

Query: 485 KVRQGITSLEEVMRVTK 501
           +   G+TSLEEV+RVT+
Sbjct: 565 QAVAGVTSLEEVLRVTR 581