Pairwise Alignments

Query, 503 a.a., type II secretion system protein GspE from Vibrio cholerae E7946 ATCC 55056

Subject, 564 a.a., type II secretion system protein E:General secretory system II, protein E, N-terminal from Pseudomonas syringae pv. syringae B728a

 Score =  350 bits (899), Expect = e-101
 Identities = 192/439 (43%), Positives = 276/439 (62%), Gaps = 15/439 (3%)

Query: 73  ESKLTQVYQR--DSSEARQLMEDIGADSDDFFSLAEELPQNEDLLESE---DDAPIIKLI 127
           + KLT    R  DS      +ED+    D      E     E  L ++   DDAP+++ +
Sbjct: 132 DDKLTVAIDRFFDSDSGLGNLEDVDLGLD-----IEPADGKETTLATQNDADDAPVVRFV 186

Query: 128 NAMLGEAIKEGASDIHIETFEKTLSIRFRVDGVLREVLAPSRKLSSLLVSRVKVMAKLDI 187
           N ML +AI+ G+SD+H E +EK   +R R DG+L EV  P   L++ + +R+KVMA LDI
Sbjct: 187 NKMLMDAIRLGSSDLHFEPYEKIFRVRLRTDGILHEVARPPIHLANRIAARLKVMASLDI 246

Query: 188 AEKRVPQDGRISLRIGG-RAVDVRVSTMPSSHGERVVMRLLDKNATRLDLHSLGMTAHNH 246
           +E+R PQDGR+ LR+   +A+D R++T+P+  GE++VMR+LD  + ++ + +LG      
Sbjct: 247 SERRKPQDGRVKLRVSKTKAIDFRMNTLPTLWGEKIVMRILDPTSAQMGIDALGYEPDQK 306

Query: 247 DNFRRLIKRPHGIILVTGPTGSGKSTTLYAGLQELNSSERNILTVEDPIEFDIDGIGQTQ 306
             +   +K P G+ILVTGPTGSGK+ +LY GL  LN+ + NI T EDP+E +++GI Q  
Sbjct: 307 ALYLEALKLPQGMILVTGPTGSGKTVSLYTGLNILNTVDINISTAEDPVEINLEGINQVN 366

Query: 307 VNPRVDMTFARGLRAILRQDPDVVMVGEIRDLETAQIAVQASLTGHLVMSTLHTNTAVGA 366
           VNPR  + F++ LRA LRQDPDV+MVGEIRDLETA+IA++AS TGH+V+STLHTN+A   
Sbjct: 367 VNPRQGLDFSQALRAFLRQDPDVIMVGEIRDLETAEIAIKASQTGHMVLSTLHTNSAAET 426

Query: 367 VTRLRDMGIEPFLISSSLLGVLAQRLVRTLCPDCKEPYEADKEQ--RKLFDSKKKEPLIL 424
           +TRL  MG+  F I++++  ++AQRL R LC  CK+  +  +E   ++ F   K     +
Sbjct: 427 LTRLHHMGVAAFNIATAINLIIAQRLARKLCSHCKKELDIPRETLIQEGFPEAKIGTFKV 486

Query: 425 YRATGCPKCNHKGYRGRTGIHELLLVDDALQELIHSEAGEQAMEKHIRAT-TPSIRDDGL 483
           Y   GC  CN  GYRGR GI+E++     L+ +I  E     + + +R      +R  GL
Sbjct: 487 YGPVGCEHCN-GGYRGRVGIYEVVKKTPELERIIMEEGNSLEISRQMRKDGFNDLRTSGL 545

Query: 484 DKVRQGITSLEEVMRVTKE 502
            K  QGITSLEEV RVTK+
Sbjct: 546 SKAMQGITSLEEVNRVTKD 564