Pairwise Alignments

Query, 503 a.a., type II secretion system protein GspE from Vibrio cholerae E7946 ATCC 55056

Subject, 604 a.a., type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB from Dechlorosoma suillum PS

 Score =  342 bits (878), Expect = 2e-98
 Identities = 185/457 (40%), Positives = 286/457 (62%), Gaps = 28/457 (6%)

Query: 71  EFESKLTQVYQRDSSEARQLMEDIGADSDDFFSLAEE-------------LPQNEDLLE- 116
           E+E +L  + ++D        +DI     +F++LA               L   E L+E 
Sbjct: 141 EWEKELKPILRKDIRRVVANPQDIARYLVEFYNLARSVKKAAAGGGEVSGLSSFEQLVEL 200

Query: 117 -------SEDDAPIIKLINAMLGEAIKEGASDIHIETFEKTLSIRFRVDGVLREVLAPSR 169
                    +D  I+ +++ +   A ++ ASDIHIE   +   +RFR+DGVL +V     
Sbjct: 201 GKTNRQFDANDQHIVHIVDWLWQYAFEQRASDIHIEPRRELGIVRFRIDGVLHQVYQIPM 260

Query: 170 KLSSLLVSRVKVMAKLDIAEKRVPQDGRISLRI-GGRAVDVRVSTMPSSHGERVVMRLLD 228
            + + + SR+K++ ++D+ EKR PQDGRI  R  GG+ V++R+ST+P++ GE++VMR+ D
Sbjct: 261 AVMAAMTSRIKLLGRMDVIEKRRPQDGRIKTRTAGGQEVELRLSTLPTAFGEKLVMRIFD 320

Query: 229 KNATRLDLHSLGMTAHNHDNFRRLIKRPHGIILVTGPTGSGKSTTLYAGLQELNSSERNI 288
                 D   LG    +   ++ +  +P+GIILVTGPTGSGK+TTLY+ L++L + E N+
Sbjct: 321 PEVLVRDFAELGFGEEDKSRWQFMTSQPNGIILVTGPTGSGKTTTLYSTLKQLATPEVNV 380

Query: 289 LTVEDPIEFDIDGIGQTQVNPRVDMTFARGLRAILRQDPDVVMVGEIRDLETAQIAVQAS 348
            T+EDPIE       Q QV+  +D+ FA G+RA++RQDPD++M+GEIRD ETA +A+QA+
Sbjct: 381 CTIEDPIEMVEQSFNQMQVSQNIDLGFADGVRALMRQDPDIIMIGEIRDGETADMAIQAA 440

Query: 349 LTGHLVMSTLHTNTAVGAVTRLRDMGIEPFLISSSLLGVLAQRLVRTLCPDCKEPYEADK 408
           LTGHLV+STLHTN A  A++RL D+G+ P+LI++++LGV+AQRLVRTLCP CK+P +  +
Sbjct: 441 LTGHLVLSTLHTNDAPSAISRLLDLGMAPYLINATMLGVMAQRLVRTLCPHCKKPVDLRR 500

Query: 409 EQRKLFDS-----KKKEPLILYRATGCPKCNHKGYRGRTGIHELLLVDDALQELIHSEAG 463
           E  +++DS     K K P  +Y+  GC +C   GY GR G++ELLL+   +++L+ +   
Sbjct: 501 EDEEIWDSLVAPWKSKRPAQIYQPVGCLECRMTGYMGRMGLYELLLMSPEVKKLVTTTTD 560

Query: 464 -EQAMEKHIRATTPSIRDDGLDKVRQGITSLEEVMRV 499
             +  E+  R     +R  G  KV  G+T+LEEV++V
Sbjct: 561 VAKVREQAYREGMKPLRISGAMKVAAGLTTLEEVIKV 597