Pairwise Alignments

Query, 503 a.a., type II secretion system protein GspE from Vibrio cholerae E7946 ATCC 55056

Subject, 788 a.a., type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB from Dechlorosoma suillum PS

 Score =  315 bits (806), Expect = 5e-90
 Identities = 184/454 (40%), Positives = 272/454 (59%), Gaps = 45/454 (9%)

Query: 83  DSSEARQLMEDIGADSDDFFSLAEELPQNEDLLESEDDAPIIKLINAMLGEAIKEGASDI 142
           D +    L+ D+G   D+    A ++  ++    +E++  ++KL+N ++ EA ++GASDI
Sbjct: 340 DVASVGDLLSDLGDGDDE----AGDVVGDDVSAAAENE--LVKLVNKIIIEASQQGASDI 393

Query: 143 HIETF---EKTLSIRFRVDGVLREVLAPSRKLSSLLVSRVKVMAKLDIAEKRVPQDGRIS 199
           HIE     EKTL IRFR DG L   +       + L++R+K+M  LDI+EKR PQDG+I 
Sbjct: 394 HIEPRPGKEKTL-IRFRKDGSLVPYIEIPASYRNALIARLKIMCDLDISEKRKPQDGKIK 452

Query: 200 LR-IGGRAVDVRVSTMPSSHG-ERVVMRLLDKNATRLDLHSLGMTAHNHDNFRRLIKRPH 257
            +  G   +++RV+T+P++ G E VVMR+L      + L SLG+T HNH+  + +I +P+
Sbjct: 453 FKKYGPLDIELRVATIPTAGGMEDVVMRILAAGEP-IPLDSLGLTPHNHETLKSIISKPY 511

Query: 258 GIILVTGPTGSGKSTTLYAGLQELNSSERNILTVEDPIEFDIDGIGQTQVNPRVDMTFAR 317
           G+  V GPTGSGK+TTL++ L  +N+ +  I T EDP+E    G+ Q Q+N +  + FA 
Sbjct: 512 GLFFVCGPTGSGKTTTLHSILGHINTPDTKIWTAEDPVEITQKGLRQVQINKKAGLDFAT 571

Query: 318 GLRAILRQDPDVVMVGEIRDLETAQIAVQASLTGHLVMSTLHTNTAVGAVTRLRDMGIEP 377
            +R+ LR DPDV+MVGE+RD ET  I ++ASLTGHLV +TLHTN+A  +V RL DMG++P
Sbjct: 572 VMRSFLRADPDVIMVGEMRDAETTGIGIEASLTGHLVFATLHTNSAPESVIRLLDMGMDP 631

Query: 378 FLISSSLLGVLAQRLVRTLCPDCKEPYEADKEQRKLF-----------DSKKKEP----- 421
           F  + +LLG+LAQRL + LC +CKE Y+   E  K             DS KK+P     
Sbjct: 632 FNFADALLGILAQRLAKRLCKECKEAYQPSPEDMKRLLTEYCEELTNTDSWKKDPKGSYE 691

Query: 422 ---------------LILYRATGCPKCNHKGYRGRTGIHELLLVDDALQELIHSEAG-EQ 465
                            LYR  GCP CN  GY+GR G+HEL+   D +++LI   A   +
Sbjct: 692 AVYRDWNSRYAKDGQFTLYRPKGCPVCNDTGYKGRVGLHELMAGTDGVKKLIQEHARVAE 751

Query: 466 AMEKHIRATTPSIRDDGLDKVRQGITSLEEVMRV 499
            +   +     +++ DG+DKV QGIT +++V  V
Sbjct: 752 LVACALNDGMRTLKMDGIDKVLQGITDMKQVHAV 785