Pairwise Alignments

Query, 503 a.a., type II secretion system protein GspE from Vibrio cholerae E7946 ATCC 55056

Subject, 568 a.a., type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB from Dechlorosoma suillum PS

 Score =  351 bits (901), Expect = e-101
 Identities = 199/506 (39%), Positives = 309/506 (61%), Gaps = 21/506 (4%)

Query: 1   MTEMVISPAERQSIRRLPFSFANRFKLV-LDWNEDFSQASIYYLAPLSMEALVETKRVVK 59
           ++  VI P+   +++ +P   A R  ++ LD++ +  + ++       + AL + +  + 
Sbjct: 70  LSRAVIDPS---ALKLVPRELAKRHHILPLDFDAESHRLTLALADINDIVALDKVRSQLN 126

Query: 60  HAFQLIEL--SQAEFESKLTQVYQRDSSEARQLMEDIGADSDDFFSLAEELPQNEDLLES 117
              ++  L   ++E +  + Q Y  + S    ++ +I     D+ SL             
Sbjct: 127 AELEIETLLAGESEIDRAIDQYYGYELS-IDGILHEIETGEIDWKSLQSS--------SD 177

Query: 118 EDDAPIIKLINAMLGEAIKEGASDIHIETFEKTLSIRFRVDGVLREVLAPSRKLSSLLVS 177
           E   P+++LI+A+L +A+K  ASD+H E     L IR+R+DG+LR++ A  +     +  
Sbjct: 178 EYSQPVVRLIDAILADAVKRDASDVHFEPEANFLRIRYRIDGMLRQIRALHKSYWPAMAV 237

Query: 178 RVKVMAKLDIAEKRVPQDGRISLRIGGRAVDVRVSTMPSSHGERVVMRLLDKNATRLDLH 237
           R+KVM+ ++IAE R PQDGRI+L + GR VD RV+  P+ HGE VV+R+LD+    + L 
Sbjct: 238 RIKVMSGMNIAETRAPQDGRINLVLSGRQVDFRVAAQPTIHGENVVLRILDRQKGIVPLE 297

Query: 238 SLGMTAHNHDNFRRLIKRPHGIILVTGPTGSGKSTTLYAGLQELNSSERNILTVEDPIEF 297
            LG+   + D  + +I RP GIILVTGPTGSGK+TTLY+ L  +NS   NI+T+EDP+E+
Sbjct: 298 GLGLAEDHLDLLKLMIARPEGIILVTGPTGSGKTTTLYSVLNHINSEGVNIMTLEDPVEY 357

Query: 298 DIDGIGQTQVNPRVDMTFARGLRAILRQDPDVVMVGEIRDLETAQIAVQASLTGHLVMST 357
            +  + QT V     + FA G+R+++RQDPDV++VGEIRD +TA++A +A++TGH V ST
Sbjct: 358 PMALVRQTSVAESAKLDFANGIRSMMRQDPDVILVGEIRDTDTAEMAFRAAMTGHQVYST 417

Query: 358 LHTNTAVGAVTRLRDMGIEPFLISSSLLGVLAQRLVRTLCPDCKEPYEADKEQRKLFDSK 417
           LHTN+A+GA+ RL D+GI P L++ +++G++AQRLVR LCP CK PY+A+  + +L    
Sbjct: 418 LHTNSAIGAIPRLLDIGILPDLMAGNIIGIVAQRLVRRLCPGCKTPYQAEAHESRLLGIP 477

Query: 418 KKEPL-ILYRATGCPKCNHKGYRGRTGIHELLLVDDALQELIHSEAGEQAMEKHIRATTP 476
            + P  ++Y   GC +C+ +GYRGR  I ELL +  A+ EL+   A   A +    AT  
Sbjct: 478 AEGPRPVIYHPCGCERCDFQGYRGRIAIMELLRMTPAMDELVARRA--TARDIRNEATRQ 535

Query: 477 SIR---DDGLDKVRQGITSLEEVMRV 499
             R   DDGL +V  G TSLEE+ RV
Sbjct: 536 GFRPLADDGLRRVLDGSTSLEELSRV 561