Pairwise Alignments

Query, 503 a.a., type II secretion system protein GspE from Vibrio cholerae E7946 ATCC 55056

Subject, 568 a.a., type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB from Dechlorosoma suillum PS

 Score =  355 bits (910), Expect = e-102
 Identities = 202/497 (40%), Positives = 305/497 (61%), Gaps = 21/497 (4%)

Query: 17  LPFSFANRFKLVLDWNEDFSQASIYYLA-PLSMEALVETKRVVKHAFQLIELSQAEFESK 75
           LP + A RF+ +    ED   A +  L  P  + A  E  R+V+   +L  +++++    
Sbjct: 81  LPEAQARRFRAIP--LEDRGSALLVGLVDPTDLLAYDEIVRLVRRDIELAVVTESQLLVT 138

Query: 76  LTQVYQRD---SSEARQLMEDIGADSDDFFSLAEELPQNEDLLESEDDAPIIKLINAMLG 132
           + ++Y+R    S  A++L  ++G    +F  L    P  ED       AP++KL+  +  
Sbjct: 139 IDRLYRRTEEISGLAKELQAELGDMPIEFGELLGLTPGAED-------APVVKLLQTVFE 191

Query: 133 EAIKEGASDIHIETFEKTLSIRFRVDGVLREVLAPSRKLSSLLVSRVKVMAKLDIAEKRV 192
           EA++  ASDIHIE  E  L IRFR+DGVL        K+++ +  R+K+M+ LDI+EKR+
Sbjct: 192 EALRTRASDIHIEPQEARLRIRFRIDGVLHIQTEADPKIATAVALRLKLMSGLDISEKRL 251

Query: 193 PQDGRISLRIGGRAVDVRVSTMPSSHGERVVMRLLDKNATRLDLHSLGMTAHNHDNFRRL 252
           PQDGR ++++    VDVR+STMP+ +GE VVMR+L ++   L L ++ M AH  D  R  
Sbjct: 252 PQDGRFNIKVRNNPVDVRISTMPTQYGESVVMRILAQSNGILGLDNIHMPAHILDRLRHA 311

Query: 253 IKRPHGIILVTGPTGSGKSTTLYAGLQELNSSERNILTVEDPIEFDIDGIGQTQVNPRVD 312
           I RP GI+LVTGPTGSGK+TTLYA L ELN++E+ ++TVEDP+E+ + GI Q QV+ ++D
Sbjct: 312 IHRPSGIVLVTGPTGSGKTTTLYAALSELNTTEKKVITVEDPVEYRLPGINQVQVHEKID 371

Query: 313 MTFARGLRAILRQDPDVVMVGEIRDLETAQIAVQASLTGHLVMSTLHTNTAVGAVTRLRD 372
           ++F R LR  LRQDPD+++VGE+RD  TA+I ++A++TGHLV+STLHTN A+    RL D
Sbjct: 372 LSFDRVLRTALRQDPDIILVGEMRDQMTAEIGMRAAMTGHLVLSTLHTNDAISTPIRLLD 431

Query: 373 MGIEPFLISSSLLGVLAQRLVRTLCPDCKEPYEADKEQRKLFDSKKKEPL---ILYRATG 429
           MG+  ++++ SL  VLAQRLVR +C  C  P+  +  +R+    +  E L      +  G
Sbjct: 432 MGVPRYMVALSLQLVLAQRLVRVICDSCAAPHVPEPHEREWLRYELGEQLDGHHFKKGAG 491

Query: 430 CPKCNHKGYRGRTGIHELLLVDDALQELIHSEAGE---QAMEKHIRATTPSIRDDGLDKV 486
           CP C   GY+GRTG+ E+L +   + E  + +      QA  K +   T  +R D +   
Sbjct: 492 CPHCGGTGYQGRTGVWEMLEMTSEVVEATNQDDPSIFMQAARKQMGGNT--LRRDAVRLA 549

Query: 487 RQGITSLEEVMRVTKES 503
           RQG T+++E MRV  ++
Sbjct: 550 RQGRTTIDEAMRVASQT 566