Pairwise Alignments

Query, 503 a.a., type II secretion system protein GspE from Vibrio cholerae E7946 ATCC 55056

Subject, 461 a.a., type II secretion system protein GspE from Klebsiella michiganensis M5al

 Score =  317 bits (811), Expect = 7e-91
 Identities = 173/383 (45%), Positives = 251/383 (65%), Gaps = 5/383 (1%)

Query: 118 EDDAPIIKLINAMLGEAIKEGASDIHIETFEKTLSIRFRVDGVLREVLAPSRKLSSLLVS 177
           E  A +++ +N +L +A+++ ASDIHIE  +  L IR RVDGVL  +   + +L++ + +
Sbjct: 76  EASASVVEQVNNLLEQALRQRASDIHIEPGDDRLRIRLRVDGVLHSLAPLAAELAAPITA 135

Query: 178 RVKVMAKLDIAEKRVPQDGRISLRIGGRAVDVRVSTMPSSHGERVVMRLLDKNATRLDLH 237
           R+KV+  LDIAE RVPQDG+ +L +  R +  R++T+P   GE++V+RLL +    LDL 
Sbjct: 136 RLKVLGNLDIAEHRVPQDGQFTLTLSERPISFRIATLPCRGGEKIVLRLLHQVEQALDLE 195

Query: 238 SLGMTAHNHDNFRRLIKRPHGIILVTGPTGSGKSTTLYAGLQELNSSERNILTVEDPIEF 297
           +LG+++     FR  + +P G++LVTGPTGSGK+ TLY+ LQ  N  E NI +VEDP+E 
Sbjct: 196 ALGLSSQQLAAFRSALNQPQGLMLVTGPTGSGKTVTLYSALQARNRDEVNICSVEDPLEI 255

Query: 298 DIDGIGQTQVNPRVDMTFARGLRAILRQDPDVVMVGEIRDLETAQIAVQASLTGHLVMST 357
            I G+ QTQ+NPR  +TF   LRA+LRQDPD+VMVGEIRD ETA+IA++A+ TGHLV+ST
Sbjct: 256 PIVGMNQTQINPRAGLTFHSVLRALLRQDPDIVMVGEIRDAETAEIAIKAAQTGHLVLST 315

Query: 358 LHTNTAVGAVTRLRDMGIEPFLISSSLLGVLAQRLVRTLCPDCKEPYEADKEQRKLFDSK 417
           LHTN+    + RL+ MG+  ++ISS+L  V+AQRLVR LCP C+    +  +   +  S 
Sbjct: 316 LHTNSTSETLVRLQQMGVARWMISSALSLVVAQRLVRKLCPHCRRETGSSAD---VPHSL 372

Query: 418 KKEPLILYRATGCPKCNHKGYRGRTGIHELLLVDDALQELIHSEAGEQAMEKHIRAT-TP 476
               L  ++A GC  C H GY GR  + ELL V+  L++ I        +E   R +   
Sbjct: 373 WPRALPRWQAPGCQHCYH-GYYGRLALFELLPVNTTLRQAITQGLSAGEIESLARESGMM 431

Query: 477 SIRDDGLDKVRQGITSLEEVMRV 499
           ++ + G   V +G+TSLEEV+RV
Sbjct: 432 TLFESGCLAVERGMTSLEEVVRV 454