Pairwise Alignments

Query, 503 a.a., type II secretion system protein GspE from Vibrio cholerae E7946 ATCC 55056

Subject, 573 a.a., general secretion pathway protein E, putative (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  374 bits (961), Expect = e-108
 Identities = 197/393 (50%), Positives = 268/393 (68%), Gaps = 12/393 (3%)

Query: 112 EDLLESEDDAPIIKLINAMLGEAIKEGASDIHIETFEKTLSIRFRVDGVLREVLAPSRKL 171
           E+L    D AP+++L+N++L +A++EGASD+HI   + +  +RFR+DG LRE  AP + +
Sbjct: 175 EELASQADLAPVVRLVNSILAQAVREGASDVHISPEKDSRQVRFRIDGKLREAPAPPKNV 234

Query: 172 SSLLVSRVKVMAKLDIAEKRVPQDGRISLRIGGRAVDVRVSTMPSSHGERVVMRLLDKNA 231
           +  +VSR+K++  +DIA  RVPQDGR ++ +  R ++VRVS++P+ +GE +V+RLLD + 
Sbjct: 235 APAMVSRLKILGNMDIAVTRVPQDGRFTMNLDNREINVRVSSIPTIYGENMVLRLLDMSG 294

Query: 232 TRLDLHSLGMTAHNHDNFRRLIKRPHGIILVTGPTGSGKSTTLYAGLQELNSSERNILTV 291
               L  LGM   +H   +R+I +P+G+IL TGPTGSGKST+LYA L+ +N+ E NI+T+
Sbjct: 295 RDYTLDQLGMEQTDHTVIKRVIHKPYGMILSTGPTGSGKSTSLYAILKSINTPEINIITL 354

Query: 292 EDPIEFDIDGIGQTQVNPRVDMTFARGLRAILRQDPDVVMVGEIRDLETAQIAVQASLTG 351
           EDP+E+ I GI Q Q+N +  MTFA GLR+ILRQDPDVVMVGEIRD ETA IAVQA+LTG
Sbjct: 355 EDPVEYRIGGIRQVQLNRKAGMTFASGLRSILRQDPDVVMVGEIRDAETASIAVQAALTG 414

Query: 352 HLVMSTLHTNTAVGAVTRLRDMGIEPFLISSSLLGVLAQRLVRTLCPDCKEPYEADKEQR 411
           HLV+STLHTN A GAVTRL DMGIEPFL+SS +L   AQRLVR +CP+C EPY+      
Sbjct: 415 HLVLSTLHTNDAAGAVTRLIDMGIEPFLVSSVMLASFAQRLVRRVCPNCAEPYDPPHAAL 474

Query: 412 KLFDSKKKE----PLILYRATGCPKCNHKGYRGRTGIHELLLVDDALQELIHSEAGEQ-- 465
             F     E         +  GC  C H GYRGRTG+ E+L +   +QEL+   +  Q  
Sbjct: 475 AAFGIDPAEGHDGRSRFLKGRGCFHCAHTGYRGRTGLFEILPMVPEIQELVVRRSSTQVI 534

Query: 466 ---AMEKHIRATTPSIRDDGLDKVRQGITSLEE 495
              A+E  +  T   +  D   KVR GIT++EE
Sbjct: 535 ANTAIEAGLMRT---LVQDAALKVRAGITTVEE 564