Pairwise Alignments

Query, 503 a.a., type II secretion system protein GspE from Vibrio cholerae E7946 ATCC 55056

Subject, 432 a.a., type IV pilus assembly protein PilB from Paraburkholderia bryophila 376MFSha3.1

 Score =  339 bits (869), Expect = 1e-97
 Identities = 183/392 (46%), Positives = 250/392 (63%), Gaps = 4/392 (1%)

Query: 114 LLESEDDAPIIKLINAMLGEAIKEGASDIHIETFEKTLSIRFRVDGVLREVLAPSRKLSS 173
           L    D+AP ++L+   L EA +  ASD+HIE  E    +R R+DGVL E+  P   L  
Sbjct: 39  LAHDPDNAPAVRLLTDTLREATRRNASDLHIEPAENGWRVRLRIDGVLHEIATPPAHLRD 98

Query: 174 LLVSRVKVMAKLDIAEKRVPQDGRISLRIG-GRAVDVRVSTMPSSHGERVVMRLLDKNAT 232
             ++RVKV+A++DIAE+RVPQDGR+ L    GR  D RV+++P+  GE++V+R LD   T
Sbjct: 99  AFITRVKVLARMDIAERRVPQDGRLRLATSPGRIEDYRVNSLPTLFGEKLVLRRLDALPT 158

Query: 233 RLDLHSLGMTAHNHDNFRRLIKRPHGIILVTGPTGSGKSTTLYAGLQELNSSERNILTVE 292
            L L SLG+ A   D     I+ PHG++LVTGPTGSGK+ +LY  L  LNS  RN+ +VE
Sbjct: 159 DLSLDSLGLDARQRDAVDSAIRAPHGLVLVTGPTGSGKTLSLYCFLNLLNSESRNLCSVE 218

Query: 293 DPIEFDIDGIGQTQVNPRVDMTFARGLRAILRQDPDVVMVGEIRDLETAQIAVQASLTGH 352
           DP E  + GI Q  V  +  +TFA  LRA LRQDPDVVMVGEIRD ETA +AV+A+ TGH
Sbjct: 219 DPAEIQLAGINQVSVREKAGLTFAVALRAFLRQDPDVVMVGEIRDEETADVAVKAAQTGH 278

Query: 353 LVMSTLHTNTAVGAVTRLRDMGIEPFLISSSLLGVLAQRLVRTLCPDCK--EPYEADKEQ 410
           LV+STLHTN A  A  RL D+G+ P+ ++++L  V AQRLVR LC  C+   P+ A   +
Sbjct: 279 LVLSTLHTNDAPAAAARLIDIGVAPYNLAAALRMVTAQRLVRRLCTACRTPAPHSAAALR 338

Query: 411 RKLFDSKKKEPLILYRATGCPKCNHKGYRGRTGIHELLLVDDALQELIHSEAGEQAMEKH 470
              F  ++ +    Y A GC  C+  GYRGR G+H+++ V DA++ELI + AG   + + 
Sbjct: 339 SAGFAEEQIDGWQPYAAKGCAACHGIGYRGRVGVHQVMPVSDAMRELIVARAGTHELARQ 398

Query: 471 IRA-TTPSIRDDGLDKVRQGITSLEEVMRVTK 501
            R+    ++RD  L +VR G TSL E +  T+
Sbjct: 399 ARSERIGTLRDAALARVRDGTTSLAEALAATE 430