Pairwise Alignments

Query, 503 a.a., type II secretion system protein GspE from Vibrio cholerae E7946 ATCC 55056

Subject, 521 a.a., type II secretion system protein E (GspE) (RefSeq) from Shewanella sp. ANA-3

 Score =  656 bits (1693), Expect = 0.0
 Identities = 338/490 (68%), Positives = 400/490 (81%), Gaps = 2/490 (0%)

Query: 13  SIRRLPFSFANRFKLVLDWNEDFSQASIYYLAPLSMEALVETKRVVKHAFQLIELSQAEF 72
           S  RLPF+FA+R +++L + +D    +++Y A   + A++E +R       L+ L   +F
Sbjct: 33  SKERLPFAFAHRHEVILAYGDD-GALNLFYTAKTPLAAMLEARRYSGADLPLVLLEPGKF 91

Query: 73  ESKLTQVYQRDSSEARQLMEDIGADSDDFFSLAEELPQNEDLLESEDDAPIIKLINAMLG 132
           E+KLTQ YQ +SSEA+QLMEDIG + D  F+LAEELPQ EDLLE +DDAPIIKLINA+L 
Sbjct: 92  EAKLTQAYQANSSEAQQLMEDIGNEMD-LFTLAEELPQTEDLLEGDDDAPIIKLINALLS 150

Query: 133 EAIKEGASDIHIETFEKTLSIRFRVDGVLREVLAPSRKLSSLLVSRVKVMAKLDIAEKRV 192
           EAIKE ASDIHIET+EK L +RFR+DGVL+EVL P+RKLSSLLVSR+KVMA+LDIAEKRV
Sbjct: 151 EAIKEEASDIHIETYEKQLVVRFRIDGVLKEVLKPNRKLSSLLVSRIKVMARLDIAEKRV 210

Query: 193 PQDGRISLRIGGRAVDVRVSTMPSSHGERVVMRLLDKNATRLDLHSLGMTAHNHDNFRRL 252
           PQDGRISLRI GRAVDVRVSTMPSSHGERVV+RLLDKNA  LDL  LGMT      F  +
Sbjct: 211 PQDGRISLRIAGRAVDVRVSTMPSSHGERVVLRLLDKNAGNLDLKQLGMTDSIRAQFDEI 270

Query: 253 IKRPHGIILVTGPTGSGKSTTLYAGLQELNSSERNILTVEDPIEFDIDGIGQTQVNPRVD 312
           I+RPHGIILVTGPTGSGKSTTLYAGL E+NS + NILTVEDPIE++++GIGQTQVN + D
Sbjct: 271 IRRPHGIILVTGPTGSGKSTTLYAGLTEINSKDTNILTVEDPIEYELEGIGQTQVNTKAD 330

Query: 313 MTFARGLRAILRQDPDVVMVGEIRDLETAQIAVQASLTGHLVMSTLHTNTAVGAVTRLRD 372
           MTFARGLRAILRQDPDVVM+GEIRDLETAQIAVQASLTGHLV+STLHTNTA GA+TRL+D
Sbjct: 331 MTFARGLRAILRQDPDVVMIGEIRDLETAQIAVQASLTGHLVISTLHTNTASGAITRLQD 390

Query: 373 MGIEPFLISSSLLGVLAQRLVRTLCPDCKEPYEADKEQRKLFDSKKKEPLILYRATGCPK 432
           MG+EPFL+SSSLLGVLAQRL+RTLCP CK  +  D+ +R+L      +   +YRA GC  
Sbjct: 391 MGVEPFLVSSSLLGVLAQRLIRTLCPKCKTEHVPDERERELLGMAADDHRHIYRANGCKA 450

Query: 433 CNHKGYRGRTGIHELLLVDDALQELIHSEAGEQAMEKHIRATTPSIRDDGLDKVRQGITS 492
           C   GYRGRTGIHELLLVDD ++ELIH   GE A+EK+IR + PSIR DG+ KV  GIT+
Sbjct: 451 CGSSGYRGRTGIHELLLVDDNVRELIHGGRGELAIEKYIRQSVPSIRHDGMSKVLSGITT 510

Query: 493 LEEVMRVTKE 502
           LEEV+RVT+E
Sbjct: 511 LEEVLRVTRE 520