Pairwise Alignments

Query, 406 a.a., type II secretion system protein GspF from Vibrio cholerae E7946 ATCC 55056

Subject, 399 a.a., type II secretory pathway, component PulF from Dechlorosoma suillum PS

 Score =  185 bits (469), Expect = 2e-51
 Identities = 118/402 (29%), Positives = 210/402 (52%), Gaps = 11/402 (2%)

Query: 1   MAAFEYKALDAKGRHKKGVIEGDNARQVRQRLKEQSLVPMEVVETQVKAARSRSQGFAFK 60
           M  F YKA+DA GR  +G ++  N   +  RLK         +E  +      S    F 
Sbjct: 1   MGLFNYKAVDADGRMIQGRLDAINLVDLEMRLKR--------MEMDLVNGTPVSSWDMFG 52

Query: 61  RGISTPDLALITRQLATLVQSGMPLEECLRAVAEQSEKPRIRTMLVAVRAKVTEGYTLSD 120
             +   +L      L  L ++G+P+ E L  + +  E PR R ++ ++   +  G TLS 
Sbjct: 53  GSVPRRELINFCFHLEQLNRAGVPILEGLSDLRDSLEHPRFREVIASLVESIEGGQTLSQ 112

Query: 121 SLGDYPHVFDELFRSMVAAGEKSGHLDSVLERLADYAENRQKMRSKLQQAMIYPVVLVVF 180
           ++  +P VF ++F S+V AGE +G L  VL+ L +  +   ++ S+ ++ ++YP  +   
Sbjct: 113 AMALHPRVFTKVFVSLVRAGELTGQLSEVLQNLTESLKWEDEIASQTKKLLMYPAFVGTI 172

Query: 181 AVGIVAFLLAAVVPKIVGQFVQ-MGQALPASTQFLLDASDFL-QHWGISLLVGLLMLIYL 238
            +G   FL+  +VP++  QFV+ MGQ LPA T+ L   SD L  +W ++LL+ +L +  L
Sbjct: 173 VLGATFFLMVYMVPQLK-QFVRNMGQELPAQTRALFFVSDLLVNYWYLALLLPILGIALL 231

Query: 239 VRWLLTKPDIRLRWDRRVISLPVIGKIARGLNTARFARTLSICTSSAIPILDGMRVAVDV 298
              L T P +R  +D   + LPV G I + +  +RFA T ++  SS IPIL+ +R   +V
Sbjct: 232 SYLLHTNPAVRHGFDAFKLKLPVFGPILKKIVLSRFANTFALLYSSGIPILESIRTTEEV 291

Query: 299 MTNQFVKQQVLAAAENVREGSSLRKALEQTKLFPPMMLHMIASGEQSGELEGMLTRAADN 358
           + N+ ++Q +    + + EG ++  A     LFPP+++ M+  GE +G L+  L   +  
Sbjct: 292 VGNRVIRQGLEKVEQLIGEGQNVTTAFHTIGLFPPLVIRMLRVGESTGSLDTALRNVSYF 351

Query: 359 QDNSFESTVNIALGIFTPALIALMAGMVLFIVMATLMPILEM 400
            +   + +V     +  PAL  ++  ++ +I++A L P+ ++
Sbjct: 352 FNRDVKESVEKIQSLIEPALTLILGSVLGWIMLAVLGPVYDV 393