Pairwise Alignments

Query, 406 a.a., type II secretion system protein GspF from Vibrio cholerae E7946 ATCC 55056

Subject, 414 a.a., type II secretory pathway, component PulF from Dechlorosoma suillum PS

 Score =  192 bits (487), Expect = 2e-53
 Identities = 114/397 (28%), Positives = 213/397 (53%), Gaps = 12/397 (3%)

Query: 12  KGRHKKGVIEGDNARQVRQRLKEQSLVPMEVVETQVKAARSRSQGFAFKRGISTPDLALI 71
           +G+ K G I     R   + + + +L    V+ T+V   R +S G      I+  D+ L 
Sbjct: 26  EGKDKTGKIIRGELRATSETVVQATLRRQGVLVTKVSKQRFKSGG-----KITDKDITLF 80

Query: 72  TRQLATLVQSGMPLEECLRAVAEQSEKPRIRTMLVAVRAKVTEGYTLSDSLGDYPHVFDE 131
           TRQLAT+++SG+PL +    V +    P +  +L+ ++A V  G  L+ +   YP  FD 
Sbjct: 81  TRQLATMMKSGVPLLQAFDIVGKGHSNPAVGKLLLDIKADVETGSALNQAFRKYPLYFDS 140

Query: 132 LFRSMVAAGEKSGHLDSVLERLADYAENRQKMRSKLQQAMIYPVVLVVFAVGIVAFLLAA 191
           LF +++ AGE++G LD++L+RLA Y E    ++SK++ A+ YP+ ++V A  I A ++  
Sbjct: 141 LFCNLIGAGEQAGILDTLLDRLAIYKEKILAVKSKIKSALFYPIAVIVVAFCITAVIMIF 200

Query: 192 VVPKIVGQFVQMGQALPASTQFLLDASD-FLQHWGISLLVGLL---MLIYLVRWLLTKPD 247
           V+P     F   G  LPA T  ++  SD F+ +W   L+ G+L   +  +L  W  ++  
Sbjct: 201 VIPAFKEVFKSFGADLPAPTLVVIAISDFFVAYW--YLIFGILGGGIYSFLESWKRSEA- 257

Query: 248 IRLRWDRRVISLPVIGKIARGLNTARFARTLSICTSSAIPILDGMRVAVDVMTNQFVKQQ 307
           +++  D+ ++ +P+ G + R    AR+ RTL+   ++ +P+++ +        N   K  
Sbjct: 258 VQIAMDKALLRMPIFGPLIRKSVIARWTRTLATMFAAGVPLVEALDSVGGASGNHVYKMA 317

Query: 308 VLAAAENVREGSSLRKALEQTKLFPPMMLHMIASGEQSGELEGMLTRAADNQDNSFESTV 367
                  V  G+SL  +++   LFP M++ M+A GE+SG L+ ML++ AD  +   + +V
Sbjct: 318 TRQIQSEVSTGTSLTNSMQNVNLFPNMVIQMVAIGEESGALDSMLSKVADFFEAEVDDSV 377

Query: 368 NIALGIFTPALIALMAGMVLFIVMATLMPILEMNNLM 404
                +  P ++ ++  ++  +V+A  +PI +M +++
Sbjct: 378 AALSSLMEPIIMVILGVLIGGMVVAMYLPIFKMGSVV 414