Pairwise Alignments

Query, 406 a.a., type II secretion system protein GspF from Vibrio cholerae E7946 ATCC 55056

Subject, 409 a.a., type II secretory pathway, component PulF from Dechlorosoma suillum PS

 Score =  186 bits (472), Expect = 1e-51
 Identities = 114/405 (28%), Positives = 194/405 (47%), Gaps = 2/405 (0%)

Query: 1   MAAFEYKALDAKGRHKKGVIEGDNARQVRQRLKEQSLVPMEV--VETQVKAARSRSQGFA 58
           MA F Y+   + G    G +E  +A  V  +L  Q + P+E+     Q   A  +     
Sbjct: 1   MANFSYRGRSSGGGLVNGSLEAMSASAVADQLLLQGITPLEIKPAPKQEDGAGLKFNLTL 60

Query: 59  FKRGISTPDLALITRQLATLVQSGMPLEECLRAVAEQSEKPRIRTMLVAVRAKVTEGYTL 118
           F   +   D+ L +RQ+ TL+++G+P+   L  + E S    ++ +L  VR  +  G  L
Sbjct: 61  FAEKVRHVDVLLFSRQIYTLLKAGVPIMRALAGLQESSSNGAMKRLLQEVRESLDSGREL 120

Query: 119 SDSLGDYPHVFDELFRSMVAAGEKSGHLDSVLERLADYAENRQKMRSKLQQAMIYPVVLV 178
           S SL  +P VF   + SMV  GE +G L+ +  RL  + +  Q MR++++ A+ YP  +V
Sbjct: 121 SASLARHPTVFPPFYLSMVRVGEMTGRLEEIFLRLFYHLDFEQFMRNQVKSALRYPSFVV 180

Query: 179 VFAVGIVAFLLAAVVPKIVGQFVQMGQALPASTQFLLDASDFLQHWGISLLVGLLMLIYL 238
                 +  +   V+P     F      LP  T+ L++ SDF+      LL GL+ +I+ 
Sbjct: 181 AAMAIAIVVVNIWVIPAFAQVFKGFNAELPFMTRLLINFSDFMVADWPYLLAGLVGIIFA 240

Query: 239 VRWLLTKPDIRLRWDRRVISLPVIGKIARGLNTARFARTLSICTSSAIPILDGMRVAVDV 298
            R  +  P  R  WDR  + +P+ GKI      ARF+R+ ++   S +P++  M V    
Sbjct: 241 FRAWVATPMGRYLWDRTKLRVPIAGKIVEKATLARFSRSFALAVRSGVPVVQAMSVVAQT 300

Query: 299 MTNQFVKQQVLAAAENVREGSSLRKALEQTKLFPPMMLHMIASGEQSGELEGMLTRAADN 358
           + N F+  ++    E V  G S+ +     ++F P++L M+A GE+SG L+ M+   AD 
Sbjct: 301 VDNVFIADKIEKMREGVERGESVLRTAISARVFTPIVLQMVAVGEESGALDDMMEEVADM 360

Query: 359 QDNSFESTVNIALGIFTPALIALMAGMVLFIVMATLMPILEMNNL 403
                E  +        P LI  +  +VL + +   +PI ++  +
Sbjct: 361 YQREVEYELKNLSQQIEPILIVALGILVLVLALGIFLPIWDLGKV 405