Pairwise Alignments

Query, 406 a.a., type II secretion system protein GspF from Vibrio cholerae E7946 ATCC 55056

Subject, 403 a.a., general secretion pathway protein F from Marinobacter adhaerens HP15

 Score =  413 bits (1062), Expect = e-120
 Identities = 205/404 (50%), Positives = 293/404 (72%), Gaps = 2/404 (0%)

Query: 1   MAAFEYKALDAKGRHKKGVIEGDNARQVRQRLKEQSLVPMEVVETQVKAARSRSQGFAFK 60
           M A+EYKALD++G+ K+GV+E D  R VRQ+L+E+ L P+ V     K  ++RS   + +
Sbjct: 1   MPAYEYKALDSRGKQKQGVVEADAPRAVRQQLRERGLTPLAVEPAAEK--QTRSNPLSSR 58

Query: 61  RGISTPDLALITRQLATLVQSGMPLEECLRAVAEQSEKPRIRTMLVAVRAKVTEGYTLSD 120
             ++  DLAL+TRQLATL+QSG+P+E+ L A A+QS KPRIR+ML+A+RAKV EGYTL+D
Sbjct: 59  GSLAAADLALVTRQLATLIQSGIPIEQALSAAAQQSPKPRIRSMLIAIRAKVMEGYTLAD 118

Query: 121 SLGDYPHVFDELFRSMVAAGEKSGHLDSVLERLADYAENRQKMRSKLQQAMIYPVVLVVF 180
           SLG++P  F  L+RS VAAGE +GHLD VL RLADY ENRQ+ R K+Q A IYP++L + 
Sbjct: 119 SLGEFPRAFPRLYRSTVAAGEHAGHLDLVLNRLADYTENRQEARQKIQLAAIYPIILSIV 178

Query: 181 AVGIVAFLLAAVVPKIVGQFVQMGQALPASTQFLLDASDFLQHWGISLLVGLLMLIYLVR 240
           A+ IV FLL  VVP I+  F++ GQ LP  T  +L  S+FL  +G+ L + L+  + + R
Sbjct: 179 AIAIVVFLLTYVVPDIIDVFLKQGQELPTLTMAMLAVSEFLADYGVYLFILLVAALMVFR 238

Query: 241 WLLTKPDIRLRWDRRVISLPVIGKIARGLNTARFARTLSICTSSAIPILDGMRVAVDVMT 300
           + LTKP  RLR+ +R++ LP+   + RG+NTAR+A TLSI T+S +P+++ MR+A +V++
Sbjct: 239 FFLTKPGFRLRFHKRLLHLPLFSGMVRGVNTARYASTLSILTTSGVPLVEAMRIAGEVLS 298

Query: 301 NQFVKQQVLAAAENVREGSSLRKALEQTKLFPPMMLHMIASGEQSGELEGMLTRAADNQD 360
           N F++Q++  AA  V EG SL ++L+QT  FPPMMLHMIASGE SGEL+ ML R A  Q+
Sbjct: 299 NDFLRQELRDAARKVSEGGSLHRSLDQTGYFPPMMLHMIASGEASGELDSMLERTARMQE 358

Query: 361 NSFESTVNIALGIFTPALIALMAGMVLFIVMATLMPILEMNNLM 404
           N+ +S +   +G+F P ++ +M  +VL IV+A ++PIL M+NL+
Sbjct: 359 NTLQSKIAAIVGLFEPMMLLVMGVVVLIIVLAIMLPILNMSNLV 402