Pairwise Alignments

Query, 406 a.a., type II secretion system protein GspF from Vibrio cholerae E7946 ATCC 55056

Subject, 401 a.a., type II secretion protein F from Klebsiella michiganensis M5al

 Score =  410 bits (1054), Expect = e-119
 Identities = 210/405 (51%), Positives = 296/405 (73%), Gaps = 5/405 (1%)

Query: 1   MAAFEYKALDAKGRHKKGVIEGDNARQVRQRLKEQSLVPMEVVETQVKAARSRSQGFAFK 60
           MA F Y+ALD +G+ ++GV + D+AR  RQ L+E+  + +++         SR     F 
Sbjct: 1   MALFRYQALDEQGKPRRGVQQADSARHARQLLREKGWLALDIDPAAGGGRPSR-----FM 55

Query: 61  RGISTPDLALITRQLATLVQSGMPLEECLRAVAEQSEKPRIRTMLVAVRAKVTEGYTLSD 120
           R  S  DLAL+TRQLATLV + +PLE+ L AVA+QSEKP+++T++  VR KV EG++L++
Sbjct: 56  RRTSARDLALVTRQLATLVAAAIPLEKALDAVAQQSEKPQLKTLIAGVRGKVLEGHSLAE 115

Query: 121 SLGDYPHVFDELFRSMVAAGEKSGHLDSVLERLADYAENRQKMRSKLQQAMIYPVVLVVF 180
           ++  +P  FD L+ +MVAAGE SGHLD VL RLADY E RQ++R++L QAMIYP+VL + 
Sbjct: 116 AMRGHPGCFDALYCAMVAAGEASGHLDGVLNRLADYTEQRQQLRARLLQAMIYPIVLTLV 175

Query: 181 AVGIVAFLLAAVVPKIVGQFVQMGQALPASTQFLLDASDFLQHWGISLLVGLLMLIYLVR 240
           AV ++  LL+ VVPK+V QF+ + QALP ST+ L+  SD L+  G  LL+ +L+LI L+R
Sbjct: 176 AVSVIVILLSTVVPKVVEQFIHLKQALPFSTRLLMAMSDMLRAAGPWLLLAILLLILLLR 235

Query: 241 WLLTKPDIRLRWDRRVISLPVIGKIARGLNTARFARTLSICTSSAIPILDGMRVAVDVMT 300
           +LL +P  RL W R ++ LP+IG++AR +N+AR+ARTLSI  +SA+P+L  MR++ DV++
Sbjct: 236 YLLRQPAKRLAWHRLLLRLPLIGRVARSVNSARYARTLSILNASAVPLLLAMRISADVLS 295

Query: 301 NQFVKQQVLAAAENVREGSSLRKALEQTKLFPPMMLHMIASGEQSGELEGMLTRAADNQD 360
           N + K+Q+ AA++ VREG SL +ALE T+LFPPMM +M+ASGE+SGEL  ML RAADNQD
Sbjct: 296 NAWAKRQLEAASDAVREGVSLHRALEMTQLFPPMMRYMVASGERSGELNSMLERAADNQD 355

Query: 361 NSFESTVNIALGIFTPALIALMAGMVLFIVMATLMPILEMNNLMS 405
               + + +AL +F P L+  MAGMVLFIV+A L PIL++N LMS
Sbjct: 356 RDLSAQIQLALSLFEPLLVVAMAGMVLFIVLAILQPILQLNTLMS 400