Pairwise Alignments

Query, 146 a.a., type II secretion system protein GspG from Vibrio cholerae E7946 ATCC 55056

Subject, 144 a.a., general secretion pathway protein G (RefSeq) from Shewanella loihica PV-4

 Score =  221 bits (564), Expect = 3e-63
 Identities = 110/147 (74%), Positives = 125/147 (85%), Gaps = 4/147 (2%)

Query: 1   MKKMRKQTGFTLLEVMVVVVILGILASFVVPNLLGNKEKADQQKAVTDIVALENALDMYK 60
           M+   KQ GFTLLEVMVV+VILGILAS VVPNL+GNK+KAD QKAV+DIVALENALDMY+
Sbjct: 1   MQARNKQKGFTLLEVMVVIVILGILASMVVPNLMGNKDKADIQKAVSDIVALENALDMYR 60

Query: 61  LDNSVYPTTDQGLEALVTKPT-NPEPRNYREGGYIKRLPKDPWGNDYQYLSPGDKGTIDV 119
           LDNSVYPTT+QGLEALV KPT +PEPRNYR  GY+KRLP+DPW NDY  LSPG++G ID+
Sbjct: 61  LDNSVYPTTEQGLEALVQKPTISPEPRNYRADGYVKRLPQDPWRNDYLLLSPGEQGKIDI 120

Query: 120 FTLGADGQEGGEGTGADIGNWNIQDFQ 146
           F+ G DGQ G E    DIGNWN+QDFQ
Sbjct: 121 FSAGPDGQPGTED---DIGNWNLQDFQ 144