Pairwise Alignments

Query, 146 a.a., type II secretion system protein GspG from Vibrio cholerae E7946 ATCC 55056

Subject, 144 a.a., general secretion pathway protein G (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  215 bits (547), Expect = 3e-61
 Identities = 106/147 (72%), Positives = 123/147 (83%), Gaps = 4/147 (2%)

Query: 1   MKKMRKQTGFTLLEVMVVVVILGILASFVVPNLLGNKEKADQQKAVTDIVALENALDMYK 60
           M+  +K  GFTLLEVMVV+VILGILAS VVPNL+GNK+KADQQKAV+DIVALENALDMYK
Sbjct: 1   MQMNKKHKGFTLLEVMVVIVILGILASMVVPNLMGNKDKADQQKAVSDIVALENALDMYK 60

Query: 61  LDNSVYPTTDQGLEALVTKPT-NPEPRNYREGGYIKRLPKDPWGNDYQYLSPGDKGTIDV 119
           LDN VYPTT+QGLEALV KPT +PEPRNYRE GY+KRLP+DPW N+Y  LSPG+   +D+
Sbjct: 61  LDNGVYPTTEQGLEALVQKPTISPEPRNYREEGYVKRLPQDPWRNNYLLLSPGENSKLDI 120

Query: 120 FTLGADGQEGGEGTGADIGNWNIQDFQ 146
           F+ G D Q G E    DIGNWN+Q+FQ
Sbjct: 121 FSAGPDSQPGTED---DIGNWNLQNFQ 144