Pairwise Alignments

Query, 194 a.a., type II secretion system protein H from Vibrio cholerae E7946 ATCC 55056

Subject, 170 a.a., type II secretion system protein GspH from Klebsiella michiganensis M5al

 Score = 56.6 bits (135), Expect = 2e-13
 Identities = 47/171 (27%), Positives = 73/171 (42%), Gaps = 39/171 (22%)

Query: 5   RGFTLLEILLVLVLVSASAVAVIATFPVSVKDEAKISAQSFYQRLLLLNEEAILSGQDFG 64
           RGFTLLE++L+L+L+  SA  V+  FP S  D A  +   F  +L  + +  + +GQ FG
Sbjct: 4   RGFTLLEMMLILLLMGVSAGMVLLAFPASRDDSAAQTLARFEAQLRFVQQRGLQTGQFFG 63

Query: 65  VRIDVDTRRLTFLQ-------LTADKGWQ--KW---QNDKMTNQTTLKEG-LQLDFELGG 111
           V +  D  +   L+         AD GW   +W   +  ++    ++  G L L F   G
Sbjct: 64  VSVHPDRWQFLVLEARDGADPAPADDGWSGYRWLPLRAGRVATSGSIAGGKLNLAF-AQG 122

Query: 112 GAWQKDDRLFNPGSLFDEEMFADEKKEQKQEPAPQLFVLSSGEVTPFTLSI 162
            AW   D                          P + +   GE+TPF L++
Sbjct: 123 EAWTPGDN-------------------------PDVLIFPGGEMTPFRLTL 148