Pairwise Alignments

Query, 194 a.a., type II secretion system protein H from Vibrio cholerae E7946 ATCC 55056

Subject, 190 a.a., general secretion pathway protein H (RefSeq) from Shewanella sp. ANA-3

 Score = 78.6 bits (192), Expect = 7e-20
 Identities = 52/186 (27%), Positives = 94/186 (50%), Gaps = 6/186 (3%)

Query: 6   GFTLLEILLVLVLVSASAVAVIATFPVSVKDEA-KISAQSFYQRLLLLNEEAILSGQDFG 64
           GFTL+E++LV++L+  +A AV  +   S   +A + +AQ F     L+ +E +LSGQ  G
Sbjct: 8   GFTLMEVMLVILLMGLTAAAVTMSIGNSGSQQALEKNAQQFIAATELVLDETVLSGQFIG 67

Query: 65  VRIDVDTRRLTFLQLTADKGWQKWQNDKMTNQTTLKEGLQLDFELGGGAWQKDDRLFNPG 124
           + ++  + +  + +   D  W   + D++ ++  ++ G+ L+  L G    ++D      
Sbjct: 68  IVVEKTSYQFVYYK---DGKWNPLEKDRILSEKQMEPGVVLNLVLDGLPLVQEDE--KDE 122

Query: 125 SLFDEEMFADEKKEQKQEPAPQLFVLSSGEVTPFTLSIFPKGQEPDEQWRVTAQENGTLR 184
           S FDE +     +++K+ P PQ+ +  SGE++ F LS   K  +      V     G L 
Sbjct: 123 SWFDEPLIEPSAEDKKKHPEPQILLFPSGEMSAFELSFMTKTDKGPLDVLVVGDALGRLT 182

Query: 185 LLAPGE 190
           L  P E
Sbjct: 183 LGRPDE 188