Pairwise Alignments

Query, 117 a.a., type II secretion system protein GspI from Vibrio cholerae E7946 ATCC 55056

Subject, 128 a.a., General secretion pathway protein I from Pseudomonas fluorescens FW300-N2E2

 Score = 54.7 bits (130), Expect = 4e-13
 Identities = 34/110 (30%), Positives = 61/110 (55%), Gaps = 3/110 (2%)

Query: 5   RGFTLLEVLVALAIFATAAISVIRSVSQHINTVNYLEEKMFAAMVVDNQMAQVMLNPQS- 63
           +GFTLLEV+VALAIFAT A +V+ +    +   + LE+++F A + DNQ++++ L   + 
Sbjct: 12  QGFTLLEVMVALAIFATLAAAVLSASQFVLKQSSGLEDRLFGAWLADNQLSELRLQAATP 71

Query: 64  LAAREGSEQMAGRTWYWKLSPVKTADNLLKAFDVSVATEKGATPVVTVRS 113
           L  +  + ++  R W  +       D  L   ++ V+  +  +P V  R+
Sbjct: 72  LGQQRLARRLDQRDWILQQRVAAARDPRLLRVEIQVS--RAGSPAVVHRT 119