Pairwise Alignments

Query, 117 a.a., type II secretion system protein GspI from Vibrio cholerae E7946 ATCC 55056

Subject, 128 a.a., type II secretion system protein GspI from Pseudomonas fluorescens FW300-N2C3

 Score = 52.8 bits (125), Expect = 2e-12
 Identities = 32/102 (31%), Positives = 54/102 (52%), Gaps = 1/102 (0%)

Query: 5   RGFTLLEVLVALAIFATAAISVIRSVSQHINTVNYLEEKMFAAMVVDNQMAQVMLNP-QS 63
           +GFTLLEV++ALAIFAT A +V+ +    +     LEE++F A + DNQ++++ L    S
Sbjct: 12  QGFTLLEVMIALAIFATLAAAVLSASQFVLKQSVTLEERLFGAWLADNQLSELRLEVITS 71

Query: 64  LAAREGSEQMAGRTWYWKLSPVKTADNLLKAFDVSVATEKGA 105
              +  +  +  R W  +       D  L   ++ V+ +  A
Sbjct: 72  PGQQRLNRHLDRRAWVLQQRIAPARDGRLLQVEIQVSRDDSA 113