Pairwise Alignments

Query, 117 a.a., type II secretion system protein GspI from Vibrio cholerae E7946 ATCC 55056

Subject, 139 a.a., general secretion pathway protein I from Pseudomonas stutzeri RCH2

 Score = 51.6 bits (122), Expect = 4e-12
 Identities = 37/100 (37%), Positives = 54/100 (54%), Gaps = 2/100 (2%)

Query: 5   RGFTLLEVLVALAIFATAAISVIRSVSQHINTVNYLEEKMFAAMVVDNQMAQVMLNPQSL 64
           RGFTLLEVLVALAIFA+ +  V+ +  + +     LEE   A  + DN+++++ L     
Sbjct: 10  RGFTLLEVLVALAIFASVSAVVLTAAGRSLTNAGRLEELTLAGWIADNRISELQLQQTPP 69

Query: 65  A-AREGSEQMAGRTWYWKLSPVK-TADNLLKAFDVSVATE 102
           A  RE  E   G   +  LS ++ +AD  L    V VA +
Sbjct: 70  AIGRETQELDYGSRKWQTLSEIEASADPGLLRVTVWVALQ 109