Pairwise Alignments

Query, 117 a.a., type II secretion system protein GspI from Vibrio cholerae E7946 ATCC 55056

Subject, 134 a.a., general secretion pathway protein I (RefSeq) from Shewanella loihica PV-4

 Score = 80.1 bits (196), Expect = 9e-21
 Identities = 42/113 (37%), Positives = 67/113 (59%), Gaps = 3/113 (2%)

Query: 6   GFTLLEVLVALAIFATAAISVIRSVSQHINTVNYLEEKMFAAMVVDNQMAQVMLNPQ--S 63
           G TLLEV+VAL +FA AA+S+ +S+ + +  +  LEE+  A  V  NQM    L  +   
Sbjct: 18  GMTLLEVIVALMVFAIAAVSITKSLGEQMANMPILEERTLAQWVASNQMVDARLEKKFPD 77

Query: 64  LAAREGSEQMAGRTWYWKLSPVKTADNLLKAFDVSVATEKGATPVVT-VRSYV 115
           L  ++GS ++AG+ WYW+   VKT D+  +   +SV+ ++    ++  V SYV
Sbjct: 78  LGRKDGSVELAGKEWYWRKEVVKTTDDNFRMIRISVSDDERYKRIIAQVSSYV 130