Pairwise Alignments

Query, 117 a.a., type II secretion system protein GspI from Vibrio cholerae E7946 ATCC 55056

Subject, 122 a.a., general secretion pathway protein I (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 91.7 bits (226), Expect = 3e-24
 Identities = 48/118 (40%), Positives = 72/118 (61%), Gaps = 3/118 (2%)

Query: 1   MKSKRGFTLLEVLVALAIFATAAISVIRSVSQHINTVNYLEEKMFAAMVVDNQMAQVMLN 60
           MK  RG TLLEV+VALA+FA AA+S+ +S+S+ +  +  LE +  A  V DNQM    L+
Sbjct: 1   MKYARGMTLLEVIVALAVFAVAAVSITKSLSEQMANMPILESRTLAQWVADNQMVDARLD 60

Query: 61  PQ--SLAAREGSEQMAGRTWYWKLSPVKTADNLLKAFDVSVATEKGATPVVT-VRSYV 115
           PQ   +  +EG  ++AG+ WYW+   VKT D+  +   +SV+ ++    +   V SYV
Sbjct: 61  PQFPEIGKKEGQVELAGKDWYWRKEVVKTTDDNFRMIRISVSEDERYQRIAAQVSSYV 118