Pairwise Alignments

Query, 117 a.a., type II secretion system protein GspI from Vibrio cholerae E7946 ATCC 55056

Subject, 159 a.a., type II secretion system protein I (GspI) from Sphingomonas koreensis DSMZ 15582

 Score = 59.3 bits (142), Expect = 2e-14
 Identities = 31/110 (28%), Positives = 59/110 (53%), Gaps = 2/110 (1%)

Query: 6   GFTLLEVLVALAIFATAAISVIRSVSQHINTVNYLEEKMFAAMVVDNQMAQVMLNPQSLA 65
           GF+L+E LVALA+ A A + +IR+V  HI++   +E +  A  V +N++A++ L     A
Sbjct: 47  GFSLIEALVALAVLAIATVGLIRAVESHIDSTRAMERRAAAMWVAENRLAEIQL--ADPA 104

Query: 66  AREGSEQMAGRTWYWKLSPVKTADNLLKAFDVSVATEKGATPVVTVRSYV 115
           A      + G+ W  +++  +T D  +    + V      +P+ ++  +V
Sbjct: 105 ANASETDLLGQQWKVEIARTRTEDAGIDKVRIQVFAAGERSPLASLDGFV 154