Pairwise Alignments

Query, 221 a.a., type II secretion system protein GspJ from Vibrio cholerae E7946 ATCC 55056

Subject, 198 a.a., type II secretion system protein GspJ from Klebsiella michiganensis M5al

 Score =  128 bits (321), Expect = 9e-35
 Identities = 72/195 (36%), Positives = 108/195 (55%), Gaps = 5/195 (2%)

Query: 14  AGFTLIEVLVAIAIFASLSVGAYQVLNQVQRSNEISAERTARLAELQRAMVIMDADFRQM 73
           +GFTL+E+L+A+AI A+LSV A  VL  V R++ ++ +++ R+  LQ+    M ADF Q+
Sbjct: 6   SGFTLVEMLLALAILAALSVAAVTVLQNVMRADTLTRDKSGRMQALQQTFSQMAADFSQI 65

Query: 74  ALRQFRTDGEAPSEQILQWKESLLDSDQHGLLFVRLGWHNPQQQFPRGEVAKVGYRLFEN 133
             R+ R      S  +       L SD   + F R GW NP    PR E+  V YRL  +
Sbjct: 66  IPRRSRD-----SASLFFAGRFQLGSDDGAIAFSRNGWPNPLGLLPRSEIQNVSYRLRGS 120

Query: 134 RLERVWWRYPDTPAGQQGLISPLLTGVEDWAVQFYLQGEWSKEWVPTNALPEAVKVTLRL 193
           +LER+ +   D   G Q  ++ +L  V  + ++FY  G W  EW     LP+ ++VTL L
Sbjct: 121 QLERLNYDQQDPLPGSQPTVTIVLRDVRAFGLRFYASGRWQDEWQQAQTLPQGLEVTLTL 180

Query: 194 KDYGEIERIYLTGGG 208
           + YGEI R++L   G
Sbjct: 181 EPYGEIRRLFLLTPG 195