Pairwise Alignments

Query, 336 a.a., type II secretion system protein K from Vibrio cholerae E7946 ATCC 55056

Subject, 282 a.a., General secretion pathway protein K from Pseudomonas fluorescens FW300-N2E2

 Score = 72.8 bits (177), Expect = 1e-17
 Identities = 90/334 (26%), Positives = 132/334 (39%), Gaps = 56/334 (16%)

Query: 3   AKQRGVALIVILLLLAVMVSIAATMAERLFSQFQRATHQLNYQQAYWYSLGVEALAKKGI 62
           ++QRGVALI +LL+L++ +   A M        Q +  QL + Q     L  EA A+  +
Sbjct: 2   SRQRGVALISVLLVLSLALLFTAGMLRSHRLLLQSSAQQLQHVQLRQLGLAAEAWAQAVL 61

Query: 63  EQS-YQDSETINLSQPWALKEQTYPLDYGQVRGKIRDMQACFNLNALAGVKLTPDSVKKP 121
           E S    S  ++LSQ WA  +  + ++  +V   I D+    NLNAL     T       
Sbjct: 62  EGSAITSSGPVDLSQDWARLKPAFEMEDAEVHIDIEDLSGRLNLNALLAQGQTDQVTLGR 121

Query: 122 YLLTVLQALLEGLEVESYQAEVIADSTLEFIDKDDSVRTAYGVEDSYYESMIPAYMAADT 181
           +  T L ALLE                                        +PA      
Sbjct: 122 W--TRLLALLE----------------------------------------LPALSLPQV 139

Query: 182 W-LADASEWRAVQQVGGETMNKALPYVCALPTDQWRLNVNTLPAEQAALLAAMFSPTLSP 240
             + + S+ R +  + G+T+ +  P+V  LP D   +N+NT P     L   M    +  
Sbjct: 140 GSVQELSQLRLLPGIDGQTLRRLEPWVVVLPRDA-LVNINTAP-----LPVLMSLDGMED 193

Query: 241 ESAKTLLEGRPFDGWASVDDFLAQSALTGVDNAVREEAKKYLSVDSHYFELDAQVLVDTS 300
           E AK L+  R    +ASV  F     L+GV           L V S +F +   V    S
Sbjct: 194 EVAKVLINQRRHRPYASVQAFTNDPLLSGVG-----IGSHGLGVSSRWFRITVSVTRADS 248

Query: 301 RVRIRSLFYSNDKKTA-TVIRRRFGGISERVSDR 333
           R+R+ S    +      TV +RRF  IS   S R
Sbjct: 249 RLRLASDIERDPVSGRWTVAQRRFLPISPSESLR 282