Pairwise Alignments

Query, 336 a.a., type II secretion system protein K from Vibrio cholerae E7946 ATCC 55056

Subject, 329 a.a., Type II secretory pathway, component PulK from Pseudomonas stutzeri RCH2

 Score =  120 bits (302), Expect = 4e-32
 Identities = 97/333 (29%), Positives = 163/333 (48%), Gaps = 31/333 (9%)

Query: 4   KQRGVALIVILLLLAVMVSIAATMAERLFSQFQRATHQLNYQQAYWYSLGVEALAKKGIE 63
           +QRGVALI +LL++A++  ++A M  R     + +++QL  +QA+ Y+LG EALA+  + 
Sbjct: 3   RQRGVALITVLLVVAIVTVVSAAMVARQQLSIRASSNQLQARQAWHYALGGEALAQAILA 62

Query: 64  QSYQDSET------------INLSQPWALKEQTYPLDYGQVRGKIRDMQACFNLNALAGV 111
           +  +   T             +L +PWA     + +D G++  +I D+   FNLN     
Sbjct: 63  RDLRTGATGEPGASGEAAAVDHLLEPWAQPLPAFEIDQGEILVRIEDLAGRFNLN----- 117

Query: 112 KLTPDSVKKPYLLTVLQALLEGLEVESYQAEVIADSTLEFIDKDDSVRTAYGVEDSYYES 171
            L  D       +   + LL  L++ +  AE + D    ++D D      +G ED+ Y +
Sbjct: 118 DLLRDQQPNTAAVEQFRRLLLRLQISAPYAERLVD----WLDPDQQPSGEFGAEDNAYLA 173

Query: 172 MIPAYMAADTWLADASEWRAVQQVGGETMNKALPYVCALPTDQWRLNVNTLPAEQAALLA 231
           + P Y  A   L D SE R +  +  E   +  PYV ALP +   LNVNT     +A++ 
Sbjct: 174 LDPPYRNAGRRLHDLSELRLLLDMREEDFQRLAPYVAALPPNV-PLNVNT----ASAMVL 228

Query: 232 AMFSPTLSPESAKTLLEGRPFDGWASVDDFLAQSALTGVDNAVREEAKKYLSVDSHYFEL 291
           +  S  LS  +A++L+E R    + +   FLAQ A+ G    ++  A   L+V S +F+ 
Sbjct: 229 SSLSDNLSLGAAESLVELRRVAPFRNSAAFLAQPAMAG--TTLQGTA---LAVGSQFFQA 283

Query: 292 DAQVLVDTSRVRIRSLFYSNDKKTATVIRRRFG 324
            ++V +   R+ + SL       +  V+ R  G
Sbjct: 284 TSEVRLGDRRLALVSLLQREQDGSVRVLARNLG 316