Pairwise Alignments

Query, 166 a.a., general secretion pathway protein GspM from Vibrio cholerae E7946 ATCC 55056

Subject, 158 a.a., general secretion pathway M protein (RefSeq) from Shewanella sp. ANA-3

 Score =  108 bits (271), Expect = 3e-29
 Identities = 50/155 (32%), Positives = 96/155 (61%), Gaps = 3/155 (1%)

Query: 9   VQAWWRSVTPREQKMVMGMGAL-TVLAIAYWGIWQPLSERTAQAQARLQTEKQLLSWVSE 67
           ++ WW+ +  REQ++V G GA+  V+ + YWGIW P++   A A   L  ++Q L++V +
Sbjct: 4   LRTWWQGLASREQQIV-GFGAVFLVIGVFYWGIWTPIANAEANALRNLTAQQQTLTYVKQ 62

Query: 68  NANDIVTLRAQGGSDAPSDQPLNQVITNSTRQFNIELIRVQPRGEMMQVWIQPLPFSQLV 127
            AN I  L+  G     S   L+ V+  +   + + + R+QP+G+ +QVW+  +PF  L+
Sbjct: 63  TANKIAGLKQSGAKPTMSGS-LSSVVNQTAGTYGLVITRMQPQGDKIQVWMDDVPFDALL 121

Query: 128 SWIAYLQERQGVSVDAIDIDRGKVNGVVEVKRLQL 162
           ++++ L +++G+S++++D+      G V+V+R+QL
Sbjct: 122 NYLSDLVQKKGLSLESVDLAEADAPGYVKVRRIQL 156