Pairwise Alignments

Query, 252 a.a., type II secretion system protein N from Vibrio cholerae E7946 ATCC 55056

Subject, 252 a.a., type II secretion system protein N from Klebsiella michiganensis M5al

 Score = 97.1 bits (240), Expect = 3e-25
 Identities = 78/253 (30%), Positives = 118/253 (46%), Gaps = 10/253 (3%)

Query: 1   MKRAVGYGLLFSTVLMTSVVVHLPAQVALSPLPLPEGLELTGIEGTLWQGQAAQVRWQGM 60
           MK  +  GLL + + +  +++  PA+  L  L L +   L    GTLWQG+A Q  W+G+
Sbjct: 1   MKNRLTIGLLLAAIYLFWLLLSAPAR--LLALTLSDDARLAQTSGTLWQGEAHQASWRGV 58

Query: 61  SLGDLNWDLHLSALLLGQLEADIRFGRGSSTQLRGKGVVGVGLSGPYADDFLLSLPAAQA 120
            L  L W+   S  L G     IRF   S   LRG+  +  GL+     +  L +PA   
Sbjct: 59  ELAYLRWEFGFSTWLPGW---HIRFNDPSG--LRGQAWLH-GLNEFVVREGRLVIPARLI 112

Query: 121 ITWLPLPVPLMAQGQLEMAVKQYRFGEPYCQQ-AEGSLAWSAAQLESPIGALQLGTVVSD 179
              L L +PL A+GQL + + +  F    C++ A  ++ W  A L SP G L+L  V   
Sbjct: 113 SQRLALGMPLEARGQLALTLPEASFNANGCRRIAASAVQWQDAALSSPAGLLELAQVNGK 172

Query: 180 FTCQES-VVTLKGGQKTAQVSSEFNLSLQPDNRYQAQAWFKPEAEFPESLKEQLSWLPQP 238
            +C  +  + +   Q + Q+S      L PD RY      +P    P  L   ++   + 
Sbjct: 173 LSCTPAGALAVALTQDSHQLSLTGQGVLTPDGRYTFNGTLQPRQAAPALLTLLVAQNGRK 232

Query: 239 DGQGRYPFNQQGQ 251
           D QGR P+  QG+
Sbjct: 233 DEQGRIPWRWQGE 245