Pairwise Alignments

Query, 286 a.a., DNA utilization protein GntX from Vibrio cholerae E7946 ATCC 55056

Subject, 250 a.a., competence protein ComF (RefSeq) from Shewanella amazonensis SB2B

 Score =  106 bits (265), Expect = 4e-28
 Identities = 85/234 (36%), Positives = 110/234 (47%), Gaps = 18/234 (7%)

Query: 59  TTAPLLTPECHLCRLALDTNSPFGVCSAC-QAWLEHGYRCARCGLPTLTPVDQCGQC--L 115
           T A  L   C LC   +   S  GVCS C Q  L HG  C  CG   +     CG C  L
Sbjct: 17  TLAQSLPNRCLLCHQTVIEGS--GVCSLCLQRCLYHGPVCLGCGRSLVNDGAFCGACRVL 74

Query: 116 GQPPPWRKLMCVGDYRFPLSDAVHQLKYQRQFWQAPRLAKLL---ATQINE-----PAPL 167
           G  P    ++    Y   L  ++  +KYQ QF     L + L    TQ+ E     P  L
Sbjct: 75  GALP----VIAPCSYHQGLGASIAAIKYQGQFAALDVLCRALMARVTQLTEEGEIPPVSL 130

Query: 168 LCSVPLHWRRRWQRGFNQSDLLARELANMLNVEYDHQLFARRRATPHQQGLSKAQRIHNL 227
           L  VPLH +R   RGFNQ+  +A  L+ +  +     L  RRR T  Q GL+   R  NL
Sbjct: 131 LLPVPLHPKRLKTRGFNQAYEIALLLSKLSGIPLCDDLLRRRRDTQPQAGLTGKARRKNL 190

Query: 228 RDAFVLNHPPNQPHVAIVDDVVTTGSTIRHLCDLLLDVGVQSIDIYCICRTPEP 281
             AF L    +Q  VA+VDDVVTTGST   +  +L   GV+ + ++C+ R   P
Sbjct: 191 LGAFELTGSCHQGSVALVDDVVTTGSTANEIATMLQLQGVR-VQVWCLARAEAP 243