Pairwise Alignments

Query, 286 a.a., DNA utilization protein GntX from Vibrio cholerae E7946 ATCC 55056

Subject, 262 a.a., competence protein ComF (RefSeq) from Shewanella sp. ANA-3

 Score =  107 bits (268), Expect = 2e-28
 Identities = 78/242 (32%), Positives = 113/242 (46%), Gaps = 13/242 (5%)

Query: 49  LAMLTHWLRKTTAPLLTPECHLCRLALDTNSPFGVCSAC-QAWLEHGYRCARCGLPTLTP 107
           L +++H  ++  A  L   C LC  +L+     G C  C Q  L     C  CG      
Sbjct: 17  LRIVSHLGQRYLAGSLPNRCLLCHQSLNAKEA-GFCQVCLQTGLYQSPICLGCGKSMSLE 75

Query: 108 VDQCGQCLGQPPPWRKLMCVGDYRFPLSDAVHQLKYQRQFWQAPRLAKLLATQINEPAP- 166
           ++ CG+C    P  RK++    Y       +  +KYQ Q    P L + L  +I +    
Sbjct: 76  LEYCGECQRHQP--RKVIAPCSYHQGFGPWIAAIKYQGQLAALPILCQALVARIGQLEQQ 133

Query: 167 -------LLCSVPLHWRRRWQRGFNQSDLLARELANMLNVEYDHQLFARRRATPHQQGLS 219
                   +  VPLH  R  QRGFNQ+ L+A EL+  L++        RR+ T  Q GL+
Sbjct: 134 GFITLPQAIVPVPLHPNRLRQRGFNQAWLIAHELSKQLSLPLACDGLIRRQDTRPQAGLN 193

Query: 220 KAQRIHNLRDAFVLNHPPNQPHVAIVDDVVTTGSTIRHLCDLLLDVGVQSIDIYCICRTP 279
             QR  NL+DAF LN       +A+VDDVVTTG+T+  +  L     +Q + I+C+ R  
Sbjct: 194 GTQRRRNLQDAFELNADFAYQRIALVDDVVTTGTTVAEIARLFEARYIQ-VQIWCLARAE 252

Query: 280 EP 281
            P
Sbjct: 253 AP 254